[OMPI users] Any Known Incompatibilities with ifort+gcc on MacOSX/Intel?

2007-03-12 Thread Brian Powell
Greetings, I have been pounding my head trying to get a large Fortran/MPI package to work on MacOSX with ifort and openmpi. This is a MacBook Pro with core duo. I do NOT believe the fault lies with openmpi; however, after searching the archives, I will ask the list for assistance. 1) I

Re: [OMPI users] signal handling

2007-03-12 Thread Ralph Castain
On 3/12/07 2:18 PM, "Reuti" wrote: > Am 12.03.2007 um 20:36 schrieb Ralph Castain: > >> ORTE propagates the signal to the application processes, but the ORTE >> daemons never actually look at the signal themselves (looks just >> like a >> message to them). So I'm a little puzzled by that erro

Re: [OMPI users] signal handling

2007-03-12 Thread Reuti
Am 12.03.2007 um 20:36 schrieb Ralph Castain: ORTE propagates the signal to the application processes, but the ORTE daemons never actually look at the signal themselves (looks just like a message to them). So I'm a little puzzled by that error message about the "daemon received signal 12" -

Re: [OMPI users] signal handling

2007-03-12 Thread Ralph Castain
It's supposed to be...but several of us have found it "blocking" somewhere in the OPAL subdirectory tree. On 3/12/07 2:06 PM, "Ben Allan" wrote: > A build-related questions about 1.1.4 > Is parallel make usage (make -j 8) supported (at least if make is gnu?). > > thanks, > Ben > > ___

Re: [OMPI users] signal handling

2007-03-12 Thread Ben Allan
A build-related questions about 1.1.4 Is parallel make usage (make -j 8) supported (at least if make is gnu?). thanks, Ben

Re: [OMPI users] LSF & OpenMPI

2007-03-12 Thread Ralph Castain
Hmmmwell, the fact is that OpenMPI may not support LSF in the sense you may be asking. As you have noticed, we don't actually read LSF enviro variables to get the allocated node info nor interface to LSF for launch. Obviously, as you have done, there are ways to work around that limitation. We

[OMPI users] LSF & OpenMPI

2007-03-12 Thread Michael
What is the status of LSF and OpenMPI? I'm running on a major HPC system using GM & LSF and we have to use a number of workarounds so that we can use OpenMPI. Specifically, using the scripts on this system we have to have our csh file source a file to set up the environment on the nodes.

Re: [OMPI users] signal handling

2007-03-12 Thread Reuti
Am 12.03.2007 um 20:22 schrieb Pak Lui: Hi Mark, Olesen, Mark wrote: I'm testing openmpi 1.2rc1 with GridEngine 6.0u9 and ran into interesting behaviour when using the qsub -notify option. With -notify, USR1 and USR2 are sent X seconds before sending STOP and KILL signals, respectively.

Re: [OMPI users] signal handling

2007-03-12 Thread Ralph Castain
ORTE propagates the signal to the application processes, but the ORTE daemons never actually look at the signal themselves (looks just like a message to them). So I'm a little puzzled by that error message about the "daemon received signal 12" - I suspect that's just a misleading message that was s

Re: [OMPI users] signal handling

2007-03-12 Thread Reuti
Am 12.03.2007 um 19:55 schrieb Ralph Castain: I'll have to look into it - I suspect this is simply an erroneous message and that no daemon is actually being started. I'm not entirely sure I understand what's happening, though, in your code. Are you saying that mpirun starts some number of a

Re: [OMPI users] signal handling

2007-03-12 Thread Pak Lui
Hi Mark, Olesen, Mark wrote: I'm testing openmpi 1.2rc1 with GridEngine 6.0u9 and ran into interesting behaviour when using the qsub -notify option. With -notify, USR1 and USR2 are sent X seconds before sending STOP and KILL signals, respectively. When the USR2 signal is sent to the process gro

Re: [OMPI users] signal handling

2007-03-12 Thread Ralph Castain
I'll have to look into it - I suspect this is simply an erroneous message and that no daemon is actually being started. I'm not entirely sure I understand what's happening, though, in your code. Are you saying that mpirun starts some number of application processes which run merrily along, and the

[OMPI users] Error in MPI_Unpack --- MPI_ERR_TRUNCATE: message truncated

2007-03-12 Thread Michael Epitropakis
Dear ompi users, I am using OpenMPI in order to parallelize an evolutionary algorithm. During the execution of the algorithm I have to send many same messages to some nodes. So, in order to generate and use these messages i use MPI_Pack and MPI_Unpack Each message has the following structure:

[OMPI users] signal handling

2007-03-12 Thread Olesen, Mark
I'm testing openmpi 1.2rc1 with GridEngine 6.0u9 and ran into interesting behaviour when using the qsub -notify option. With -notify, USR1 and USR2 are sent X seconds before sending STOP and KILL signals, respectively. When the USR2 signal is sent to the process group with the mpirun process, I re