Re: [O-MPI users] A few benchmarks

2006-02-06 Thread Glen Kaukola
George Bosilca wrote: Glen, Thanks for the spending time benchmarking OpenMPI and for sending us the feedback. We know we have some issues on the 1.0.2 version, more precisely with the collective communications. We just look inside the CMAQ code, and there are a lot of reduce and Allreduce. As i

[O-MPI users] OpenMPI and Xgrid

2006-02-06 Thread Warner Yuen
Brian help!! :-) On Feb 5, 2006, at 9:00 AM, users-requ...@open-mpi.org wrote: If this is the case, my next question is, how do I supply the usual xgrid options, such as working directory, standard input file, etc? Or is that simply not possible? Do I simply have to have some other way (eg

Re: [O-MPI users] Configuring OPEN MPI 1.0.1 MAC OS X 10.4.4

2006-02-06 Thread Xiaoning (David) Yang
Thank you Brian Barrett and Brian Granger. I downloaded and installed a new version of gfortran from http://gcc.gnu.org/wiki/GFortranBinaries and the install went without a problem. I had gfortran installed before from Fink. David * Correspondence * > From: Brian Barrett > Reply-To: O

[O-MPI users] mpirun sets umask to 0

2006-02-06 Thread Glenn Morris
mpirun (v1.0.1) sets the umask to 0, and hence creates world-writable output files. Interestingly, adding the -d option to mpirun makes this problem go away. To reproduce: mpirun -np 1 --hostfile ./hostfile --mca pls_rsh_agent ssh ./a.out where a.out is compiled from: #include #include #inclu

Re: [O-MPI users] Open-MPI all-to-all performance

2006-02-06 Thread Konstantin Kudin
Dear Galen, It actually turns out that there is a problem not only with MPI_Alltoall_Isend_Irecv, but also with another related operation insyncol_MPI_Alltoallv-nodes-long-SM.ski (this what seems to be holding down the FFTs, I checked the source code, and it uses alltoallv): #/*@insyncol_MPI_Al

Re: [O-MPI users] ft state in ompi

2006-02-06 Thread Josh Hursey
mlistus, Thank you for your question. The integration of fault tolerant techniques into Open MPI is under active development at the moment. As the site notes, we are scheduled to incorporate many forms of fault tolerance into Open MPI which were previously supported by our core projects,

[O-MPI users] ft state in ompi

2006-02-06 Thread m listus
hello list, i'd like to know about the state of fault-tolerance in open-mpi. it's said on the site that ompi takes features from ft-mpi and la-mpi (among others), but i couldn't find any reference on the site, nor during my superficial search in the sources. so, is ft implemented or en route? thank