Re: Missing shuffle files

2015-02-28 Thread Corey Nolet
end and having >>>> too few in the beginning. By coalescing at late as possible and avoiding >>>> too few in the beginning, the problems seems to decrease. Also, increasing >>>> spark.akka.askTimeout and spark.core.connection.ack.wait.timeout >>>

Re: Missing shuffle files

2015-02-24 Thread Anders Arpteg
gt;> too few in the beginning, the problems seems to decrease. Also, increasing >>> spark.akka.askTimeout and spark.core.connection.ack.wait.timeout >>> significantly (~700 secs), the problems seems to almost disappear. Don't >>> wont to celebrate yet, still long

Re: Missing shuffle files

2015-02-23 Thread Corey Nolet
t's >> looking better... >> >> On Mon, Feb 23, 2015 at 9:54 PM, Corey Nolet wrote: >> >>> I'm looking @ my yarn container logs for some of the executors which >>> appear to be failing (with the missing shuffle files). I see exceptions >>> that

Re: Missing shuffle files

2015-02-23 Thread Corey Nolet
e but it's > looking better... > > On Mon, Feb 23, 2015 at 9:54 PM, Corey Nolet wrote: > >> I'm looking @ my yarn container logs for some of the executors which >> appear to be failing (with the missing shuffle files). I see exceptions >> that say

Re: Missing shuffle files

2015-02-23 Thread Anders Arpteg
ing better... On Mon, Feb 23, 2015 at 9:54 PM, Corey Nolet wrote: > I'm looking @ my yarn container logs for some of the executors which > appear to be failing (with the missing shuffle files). I see exceptions > that say "client.TransportClientFactor: Found inactive connection

Re: Missing shuffle files

2015-02-23 Thread Corey Nolet
I'm looking @ my yarn container logs for some of the executors which appear to be failing (with the missing shuffle files). I see exceptions that say "client.TransportClientFactor: Found inactive connection to host/ip:port, closing it." Right after that I see "shuffle.

Re: Missing shuffle files

2015-02-23 Thread Anders Arpteg
No, unfortunately we're not making use of dynamic allocation or the external shuffle service. Hoping that we could reconfigure our cluster to make use of it, but since it requires changes to the cluster itself (and not just the Spark app), it could take some time. Unsure if task 450 was acting as

Re: Missing shuffle files

2015-02-22 Thread Sameer Farooqui
Do you guys have dynamic allocation turned on for YARN? Anders, was Task 450 in your job acting like a Reducer and fetching the Map spill output data from a different node? If a Reducer task can't read the remote data it needs, that could cause the stage to fail. Sometimes this forces the previou

Re: Missing shuffle files

2015-02-21 Thread Petar Zecevic
Could you try to turn on the external shuffle service? spark.shuffle.service.enable= true On 21.2.2015. 17:50, Corey Nolet wrote: I'm experiencing the same issue. Upon closer inspection I'm noticing that executors are being lost as well. Thing is, I can't figure out how they are dying. I'm u

Re: Missing shuffle files

2015-02-21 Thread Corey Nolet
I'm experiencing the same issue. Upon closer inspection I'm noticing that executors are being lost as well. Thing is, I can't figure out how they are dying. I'm using MEMORY_AND_DISK_SER and i've got over 1.3TB of memory allocated for the application. I was thinking perhaps it was possible that a s

Missing shuffle files

2015-02-21 Thread Anders Arpteg
For large jobs, the following error message is shown that seems to indicate that shuffle files for some reason are missing. It's a rather large job with many partitions. If the data size is reduced, the problem disappears. I'm running a build from Spark master post 1.2 (build at 2015-01-16) and run