Re: 8.0.32-1ubuntu1.3~ppa2 patches not in tomcat8 8.0.32-1ubuntu1.4

2017-07-27 Thread Jack Howarth
Nish, If you are interested at looking at the MetaboAnalyst war issue directly, you can do so as follows on xenial x86_64... sudo add-apt-repository ppa:marutter/c2d4u sudo add-apt-repository ppa:marutter/rrutter sudo apt-get update sudo apt-get install r-cran-bh r-cran-bitops r-cran-boot r-c

Re: 8.0.32-1ubuntu1.3~ppa2 patches not in tomcat8 8.0.32-1ubuntu1.4

2017-07-27 Thread Jack Howarth
Nish, Can you recreate your test packaging on https://launchpad.net/~nacc/+archive/ubuntu/tomcat8v2/+packages based off of the current tomcat8 package in xenial? I would be happy to test if your proposed bug fixes resolve the problems with ubuntu's tomcat failing to run the MetaboAnalyst war

Re: 8.0.32-1ubuntu1.3~ppa2 patches not in tomcat8 8.0.32-1ubuntu1.4

2017-07-27 Thread Jack Howarth
Nish, Nevermind. I manually installed your previous test packages under current xenial and those changes don't solve the breakage in running the MetaboAnalyst war under tomcat8 on ubuntu. As I mentioned before, when using glassfish there is no problems running MetaboAnalyst but under tomca8, o

Re: 8.0.32-1ubuntu1.3~ppa2 patches not in tomcat8 8.0.32-1ubuntu1.4

2017-07-27 Thread Nish Aravamudan
Hi Jack, On Thu, Jul 27, 2017 at 5:33 PM, Jack Howarth wrote: > Nish, > Nevermind. I manually installed your previous test packages under > current xenial and those changes don't solve the breakage in running the > MetaboAnalyst war under tomcat8 on ubuntu. As I mentioned before, when using

Re: 8.0.32-1ubuntu1.3~ppa2 patches not in tomcat8 8.0.32-1ubuntu1.4

2017-07-27 Thread Nish Aravamudan
On Thu, Jul 27, 2017 at 5:04 PM, Jack Howarth wrote: > Nish, >Can you recreate your test packaging on > https://launchpad.net/~nacc/+archive/ubuntu/tomcat8v2/+packages based off of > the current tomcat8 package in xenial? I would be happy to test if your > proposed bug fixes resolve the pr

Re: 8.0.32-1ubuntu1.3~ppa2 patches not in tomcat8 8.0.32-1ubuntu1.4

2017-07-27 Thread Nish Aravamudan
On Thu, Jul 27, 2017 at 12:00 PM, Robie Basak wrote: > On Thu, Jul 27, 2017 at 09:48:06AM -0400, Jack Howarth wrote: >>Is there a reason that the patches present in the test tomcat8 >> 8.0.32-1ubuntu1.3~ppa2 were dropped from tomcat8 8.0.32-1ubuntu1.4? > > Where were you getting 8.0.32-1ubuntu

Re: 8.0.32-1ubuntu1.3~ppa2 patches not in tomcat8 8.0.32-1ubuntu1.4

2017-07-27 Thread Robie Basak
On Thu, Jul 27, 2017 at 09:48:06AM -0400, Jack Howarth wrote: >Is there a reason that the patches present in the test tomcat8 > 8.0.32-1ubuntu1.3~ppa2 were dropped from tomcat8 8.0.32-1ubuntu1.4? Where were you getting 8.0.32-1ubuntu1.3~ppa2 from? That doesn't sound like something that would h

8.0.32-1ubuntu1.3~ppa2 patches not in tomcat8 8.0.32-1ubuntu1.4

2017-07-27 Thread Jack Howarth
Is there a reason that the patches present in the test tomcat8 8.0.32-1ubuntu1.3~ppa2 were dropped from tomcat8 8.0.32-1ubuntu1.4? I ask because the Metaboanalyst server war has been broken under the ubuntu tomcat7 and tomcat8 for quire some time and this is widely reported by end users... http