[Bug 803185] Re: ncbi-blast+ version 2.2.25-3 failed to build on i386

2012-07-03 Thread Heidi Pagan
Seth, You can add it right into the 'make' command after configuration: make CXXFLAGS="-fpermissive" -- You received this bug notification because you are a member of Ubuntu Bugs, which is subscribed to Ubuntu. https://bugs.launchpad.net/bugs/803185 Title: ncbi-blast+ version 2.2.25-3 failed

[Bug 803185] Re: ncbi-blast+ version 2.2.25-3 failed to build on i386

2012-03-22 Thread Heidi Pagan
Helpful suggestions from another forum led me to this solution: Add -fpermissive to your CXXFLAGS -- You received this bug notification because you are a member of Ubuntu Bugs, which is subscribed to Ubuntu. https://bugs.launchpad.net/bugs/803185 Title: ncbi-blast+ version 2.2.25-3 failed to b

[Bug 803185] Re: ncbi-blast+ version 2.2.25-3 failed to build on i386

2012-03-14 Thread Heidi Pagan
Thanks so much for the fast response, but unfortunately I am still getting the same error message. Combing back through the output, I noticed another error further up: In file included from /home/hjtp/Downloads/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/dbapi/driver/impl/dbapi_impl_result.hpp

[Bug 803185] Re: ncbi-blast+ version 2.2.25-3 failed to build on i386

2012-03-14 Thread Heidi Pagan
Julian - thanks for the info, and sorry for the delayed response. I barely know enough to get around linux, and know nothing about using a patch. Is this part of the 'make' file command? Or do I add it into the Makefile somewhere? -- You received this bug notification because you are a member

[Bug 803185] Re: ncbi-blast+ version 2.2.25-3 failed to build on i386

2012-01-30 Thread Heidi Pagan
I am having this error while trying to install the rmblast package 2.2.23 in ubuntu (modified version of NCBI Blast to use with RepeatMasker: http://www.repeatmasker.org/RMBlast.html). Is there a fix for this? Here is the error I get after executing 'make': make[8]: Leaving directory `/usr/local