Re: [slurm-users] srun seg faults immediately from within sbatch but not salloc

2018-05-09 Thread a . vitalis
Hi Benjamin, thanks for getting back to me! I somehow failed to ever arrive at this page. Andreas -"slurm-users" wrote: - To: slurm-users@lists.schedmd.com From: Benjamin Matthews Sent by: "slurm-users" Date: 05/09/2018 01:20AM Subject: Re: [slurm-users] srun seg faults immediately fr

Re: [slurm-users] srun seg faults immediately from within sbatch but not salloc

2018-05-08 Thread a . vitalis
Dear all, I tried to debug this with some apparent success (for now). If anyone cares: With the help of gdb inside sbatch, I tracked down the immediate seg fault to strcmp. I then hacked src/srun/srun.c with some info statements and isolated this function as the culprit: static void _setup_env_

[slurm-users] srun seg faults immediately from within sbatch but not salloc

2018-05-07 Thread a . vitalis
Dear all, I am trying to set up a small cluster running slurm on Ubuntu 16.04. I installed slurm-17.11.5 along with pmix-2.1.1 on an NFS-shared partition. Installation seems fine. Munge is taken from the system package. Something like this: ./configure --prefix=/software/slurm/slurm-17.11.5 --ex