Re: [sage-devel] sage 6.7 failed to load jmol to display 3d object

2015-07-15 Thread rt.
In fact, I'm not sure is the java in my notebook have anything to do with oracle, as I have only installed the Free Software icedtea for java dependancies. Unluckily, icedtea which was built on my laptop doesn't work well as icedtea-bin which was compiled by gentoo official for saving the time

Re: [sage-devel] sage 6.7 failed to load jmol to display 3d object

2015-07-15 Thread Francois Bissey
In your original report you were using oracle java. Could be a compatibility problem but then in jmol. We probably could do a better packaging job with jmol but it is a bit of a headache. François > On 15/07/2015, at 23:52, rt. wrote: > > it seems that it's the icedtea who have caused the pro

Re: [sage-devel] sage 6.7 failed to load jmol to display 3d object

2015-07-15 Thread rt.
it seems that it's the icedtea who have caused the problem, I tried to emerged icedtea-bin and set it to be the system java-vm, and Jmol was invoked and behaved as it should be, maybe I should post a bug for icedtea 在 2015年7月14日星期二 UTC+8上午9:39:44,François写道: > > What about posting "/root/.sage/t

Re: [sage-devel] sage 6.7 failed to load jmol to display 3d object

2015-07-13 Thread rt.
when excuted as a regular user, this file still comes with empty contents. It's indeed no easy to diagnose sage-on-gentoo with no sage-on-gentoo on the computer, now that I have got to know the more appropriate place to report the bug, I'd better to file bugs there later. thanks! :) 在 2015年7月14

Re: [sage-devel] sage 6.7 failed to load jmol to display 3d object

2015-07-13 Thread Francois Bissey
What about posting "/root/.sage/temp/rt./12958/tmp_KGOIjb.txt” or its equivalent when run as a normal user? I will only be able to test this tomorrow when I get physical access to a machine with sage-on-gentoo. François > On 14/07/2015, at 13:35, rt. wrote: > > I just switch to a normal user

Re: [sage-devel] sage 6.7 failed to load jmol to display 3d object

2015-07-13 Thread rt.
I just switch to a normal user, it still returns the same error. And before this, I am always using root to do the daily job, and sage works well. (just for convinience, these days I'm considering rearrange my system, and maybe, a normal user will be applied to do the daily job) thanks! :) 在 201

Re: [sage-devel] sage 6.7 failed to load jmol to display 3d object

2015-07-13 Thread Francois Bissey
First I would try to use sage as your regular user, then we can talk about any problems arising. François > On 14/07/2015, at 13:27, rt. wrote: > > It's strange that all the file in the directory is empty,and I find > scene.spt.zip > in the subdirectory,but when try to display it directly wit

Re: [sage-devel] sage 6.7 failed to load jmol to display 3d object

2015-07-13 Thread rt.
It's strange that all the file in the directory is empty,and I find scene.spt.zip in the subdirectory,but when try to display it directly with Jmol: jmol /root/.sage/temp/rt./29736/dir_fz8ajw/scene.spt.zip splash_image=jar:file:/usr/share/sage-jmol-bin/lib/Jmol.jar!/org/openscience/jmol/app/ima

Re: [sage-devel] sage 6.7 failed to load jmol to display 3d object

2015-07-13 Thread Francois Bissey
I think your problem is because you are running sage as root, but from a normal user session. The big clue is that your $DOT_SAGE folder is “/root/.sage”. Please try as a normal user. François > On 14/07/2015, at 13:14, rt. wrote: > > this seems not to be my case, as François said, this problem

Re: [sage-devel] sage 6.7 failed to load jmol to display 3d object

2015-07-13 Thread Francois Bissey
Hi rt, sage-on-gentoo bugs are best discussed in a github issue unless you can reproduce it in a “vanilla” sage build. Github issue for sage-on-gentoo: https://github.com/cschwan/sage-on-gentoo/issues Funny that your message lead Volker to something that was wrong in vanilla when your problem is

[sage-devel] sage 6.7 failed to load jmol to display 3d object

2015-07-13 Thread rt.
this is a newly built version together with gentoo, while the other functions works well with only 3d plot failed. As I excute the following command: sage: var('x,y') sage: plot3d(sin(x*y), (x, -pi, pi), (y, -pi, pi)) it returns : /usr/lib64/python2.7/site-packages/sage/repl/rich_output/display