Laurent,
It is the last line of the example which is the vegdist function. I did find
on a smaller input matrix it works fines. I mucked around with it a little
more last night and I narrowed it down to somewhere in the last 354 rows (total
2854 rows x 11 cols) of the input matrix. I don't se
It is surprising that you observe a time difference between rpy and R
for the code you are showing and for the same dataset (and presumably in
the same conditions - that is you are not running a huge process while
trying rpy but not when trying R). What you are doing is
evaluate R code in a stri