Anyone out there who can help us with this? We really need to get rpy running.
On Sun, Jul 16, 2017 at 6:22 PM, Larry Martell wrote:
> I also tried building rpy2 from source and that failed with:
>
> gcc -pthread -shared
> build/temp.linux-x86_64-2.7/./rpy/rinterface/_rinterface.o
> -L/usr/local/
I also tried building rpy2 from source and that failed with:
gcc -pthread -shared
build/temp.linux-x86_64-2.7/./rpy/rinterface/_rinterface.o
-L/usr/local/lib64/R/lib -Lbuild/temp.linux-x86_64-2.7
-Wl,-R/usr/local/lib64/R/lib -lRblas -lgfortran -lm -lreadline -lpcre
-llzma -lbz2 -lz -lrt -ldl -lm -
I upgraded to R 3.3.3 and now the rpy2 install fails with this:
Collecting rpy2
Using cached rpy2-2.8.6.tar.gz
Requirement already satisfied (use --upgrade to upgrade): six in
/usr/local/lib/python2.7/site-packages (from rpy2)
Requirement already satisfied (use --upgrade to upgrade):
singledi
Yes, I see that warning, but I have R version 3.1.0 and the rpy2 docs
say it works with 3.1+
How do I fix the 'R headers cannot be found' issue? I do have R-devel installed.
On Mon, Jul 10, 2017 at 6:34 PM, Laurent Gautier wrote:
> R headers cannot be found.
>
> Note that there is a warning abou
R headers cannot be found.
Note that there is a warning about the R version being too old for support
with that version of rpy2 ( maybe it will work, maybe it won't).
On Mon, Jul 10, 2017, 11:18 AM Larry Martell
wrote:
> Trying to install rpy2 on redhat 6.7. I have R version 3.1.0:
>
> $ R --ve
Trying to install rpy2 on redhat 6.7. I have R version 3.1.0:
$ R --version
R version 3.1.0 (2014-04-10) -- "Spring Dance"
Here is what I get from pip2.7 install rpy2:
$ pip install rpy2
Collecting rpy2
Downloading rpy2-2.8.6.tar.gz (191kB)
100% || 194kB 1
