> ?! Weren't you on a Linux machine ?
> (aqua is for OS X, and your machine is amd64 - not something OS X is
> known to be officially working on)
Yes, Gentoo linux.
> Did you try having the install clearly distinct by using the option
> --prefix (and a setting PYTHONPATH accordingly) ?
I ended u
On Fri, 2009-04-10 at 12:51 -0400, Mark Larsen wrote:
> Thanks Laurent.
>
> > Where was the hack needed ?
> > Setting your target R as the first one found in the PATH should be
> > enough.
>
> You are correct, I didn't need to hack it, I wasn't sure. My hack was
> to hardcode RHOMES.
Well, on
Thanks Laurent.
> Where was the hack needed ?
> Setting your target R as the first one found in the PATH should be
> enough.
You are correct, I didn't need to hack it, I wasn't sure. My hack was
to hardcode RHOMES.
A little progress. rpy2.robjects imports against R version 2.8.1 but
when I do
On Thu, 2009-04-09 at 21:45 -0500, Mark Larsen wrote:
> Hate to keep replying to my own message but...
>
> I thought I'd throw a newer version of R at this problem. My above
> errors are with 2.7.1 and I thought I'd test with 2.8.2 (my
> development box, where all works well is at 2.7.2). I ke
On Thu, 2009-04-09 at 15:59 -0400, Mark Larsen wrote:
> I have an R function that returns a list of Matrices and Vectors.
>
> I've been processing the return list like:
>
> rpyRV = rpy2.robjects.r.someFunc()
> for property,rObj in zip([i for i in rpyRV.getnames()],[i for i in
> rpyRV]):
> # d
Hate to keep replying to my own message but...
I thought I'd throw a newer version of R at this problem. My above errors
are with 2.7.1 and I thought I'd test with 2.8.2 (my development box, where
all works well is at 2.7.2). I kept my main 2.7.1 install in /usr/lib64 and
installed 2.8.2 into /u
Sorry, forgot the backtrace -->
(gdb) run test.py
Starting program: /usr/bin/python test.py
(no debugging symbols found)
[Thread debugging using libthread_db enabled]
[New Thread 46912506825472 (LWP 7658)]
[New Thread 1082132832 (LWP 7675)]
[New Thread 1090525536 (LWP 7676)]
Program received sign
I have an R function that returns a list of Matrices and Vectors.
I've been processing the return list like:
rpyRV = rpy2.robjects.r.someFunc()
for property,rObj in zip([i for i in rpyRV.getnames()],[i for i in rpyRV]):
# do stuff with results
On my development box (64 bit, dual XEON) everythi
