On Thu, Nov 12, 2009 at 2:30 PM, Nick Schurch wrote:
> OK, I'm still having issues with a related problem to the one I had before.
>
> The R package pvclust produces a list object. One of the entries in it is
> ...$hclust$labels. I want to replace this with a list of my own and then
> feed it inot
OK, I'm still having issues with a related problem to the one I had before.
The R package pvclust produces a list object. One of the entries in it is
...$hclust$labels. I want to replace this with a list of my own and then
feed it inot another r package. In R I would do...
results=pvclust(mydata,
On Tue, Oct 20, 2009 at 5:01 AM, Nick Schurch wrote:
> I have a dataframe called 'genedata' with columns like '$R', '$G' and
> '$Genes' and I want to be able to pass a specific column as a
> parameter to a new R function. I've had a look at the manual and I
> think I should be using something like
Bioconductor is using so-called "S4 objects" .
Handling them in rpy2 is straightforward.
L.
PS: I am working on a bioconductor extension to rpy2,
which may make the jump (even more) worthy.
PPS: I had CLASS_CONVERSION issues in the past and did not manage to
overcome them.
Nick Schurch wrot
HI all,
I'm having some problems understanding how to access data inside a
dataframe with rpy.
I have a dataframe called 'genedata' with columns like '$R', '$G' and
'$Genes' and I want to be able to pass a specific column as a
parameter to a new R function. I've had a look at the manual and I
thi
