Re: [Rpy] Errors in installing rpy2

2014-12-13 Thread Xinxin Peng
rather than a sequence (which should > never be the case). > > Best, > > > Laurent > > > On 12/13/2014 08:41 PM, Xinxin Peng wrote: > > Hi Laurent, > > I am using gcc rather than clang. > > I have corrected the typo in setup.py. This time I can run

Re: [Rpy] Errors in installing rpy2

2014-12-13 Thread Xinxin Peng
gcc: d: No such file or directory gcc: e: No such file or directory gcc: cannot specify -o with -c or -S with multiple files error: command 'gcc' failed with exit status 1 = Thanks, Xinxin On Sun, Dec 14, 2014 at 9:38 AM, Xinxin Peng wrote: > > Hi Laurent, &g

Re: [Rpy] Errors in installing rpy2

2014-12-12 Thread Xinxin Peng
name 'warnigs' is not defined Thanks, Xinxin On Sat, Dec 13, 2014 at 11:54 AM, Laurent Gautier wrote: > > That's an error in a different place. We are progressing > > Try again: > pip install https://bitbucket.org/lgautier/rpy2/get/version_2.5.x.tar.gz > > 201

Re: [Rpy] Errors in installing rpy2

2014-12-12 Thread Xinxin Peng
ble Thanks a lot. Xinxin On Sat, Dec 13, 2014 at 10:49 AM, Laurent Gautier wrote: > > Typo in the fix. > > Try a snapshot from bitbucket: > > pip install https://bitbucket.org/lgautier/rpy2/get/version_2.5.x.tar.gz > > > 2014-12-12 21:08 GMT-05:00 Xinxin Peng : > &

Re: [Rpy] Errors in installing rpy2

2014-12-12 Thread Xinxin Peng
; - >> >> Traceback (most recent call last): >> File "setup.py", line 280, in >> ri_ext = getRinterface_ext() >> File "setup.py", line 206, in getRinterface_ext >> include_dirs.extend(args.I) >

[Rpy] Errors in installing rpy2

2014-12-12 Thread Xinxin Peng
Hi all, I have been trying to install rpy2-2.5.2 on a high performance computer and run into the following errors: Traceback (most recent call last): File "setup.py", line 275, in ri_ext = getRinterface_ext() File "setup.py", line 189, in getRinterface_ext ldf = shlex.split(' '.join(