Re: [Rpy] RPy2 2.9.0dev segementation fault

2016-12-07 Thread Wim R. Cardoen
essing that it is trying to link / use the system's BLAS (and this is > ending in a segfault). > > Try setting LD_LIBRARY_PATH to have both the path to your openblas library > and to R's own shared library before running Python with rpy2. > Something like this: > > expor

Re: [Rpy] RPy2 2.9.0dev segementation fault

2016-12-07 Thread Wim R. Cardoen
t the ability to reproduce (not much > you can do about for now, this seems something specific to your system). > > Do you have an environment variable R_HOME defined ? What are your > LD_LIBRARY_PATH like ? Is your customized with ${R_HOME}/etc or ~/.R ? What > does the shell command

[Rpy] RPy2 2.9.0dev segementation fault

2016-12-07 Thread Wim R. Cardoen
Hello, I compiled R v 3.3.2 with openblas (single threaded version). uname -a >Linux dirac.chpc.utah.edu 3.10.0-327.36.3.el7.x86_64 #1 SMP Mon Oct 24 16:09:20 UTC 2016 x86_64 x86_64 x86_64 GNU/Linux gcc: gcc version 4.8.5 20150623 (Red Hat 4.8.5-4) (GCC) After installing the 2.9.0dev version of