I am not certain to follow your reasoning, and to demonstrate by the
example I just opened a quartz interactive device, and made plots in it,
with the following install:
- OS X Leopard
- Python 2.6 (from MacPorts)
- R 2.10 (from CRAN, that's a Framework build)
- rpy2 (compiled from source)
L.
Only framework builds of python can plot to a quartz device, do things
like MacPorts and Fink can't do it. However, everything else can
(Apple's python, Enthought, ActiveState)
By default matplotlib, ReInteract, as well as R itself, plot to a
Quartz device. So it seems like it shouldn't be too h
I have forgotten one line before 'chisq_test = ro.r(code)':
code = ''.join(code)
L.
Hao Fan wrote:
> Cool, I will try the new source. Thanks a lot!
>
>
> Hao
>
>
>> This will not work.
>>
>> Since the problem was fixed in the R source, what about just using it ?
>>
>> # ---
>> import urll
Cool, I will try the new source. Thanks a lot!
Hao
>
> This will not work.
>
> Since the problem was fixed in the R source, what about just using it ?
>
> # ---
> import urllib
> page =
> urllib.urlopen("https://svn.r-project.org/R/branches/R-2-10-branch/src/library/stats/R/chisq.test.R";)
There might not be so much experience with that (as I recollect issues
with the combo Enthought Python / rpy2, at least until recently).
Are you certain to plot into a Quartz device ? Unless you open one,
the default is to open an X11 window (I think).
L.
Virgil Griffith wrote:
> I've success
This will not work.
Since the problem was fixed in the R source, what about just using it ?
# ---
import urllib
page =
urllib.urlopen("https://svn.r-project.org/R/branches/R-2-10-branch/src/library/stats/R/chisq.test.R";)
code = page.readlines()
chisq_test = ro.r(code)
# this will now work
#
Hi, Laurent and list,
Thanks a lot for all the informations! I read through your
discussions at
https://stat.ethz.ch/pipermail/r-devel/2009-November/055701.html So it
is a R problem not rpy. :-)
I tried to work around this problem using the following code:
-
I've successfully installed rpy2 against the Enthought Python
distribution (a framework build of python). Has anyone gotten
plotting via Quartz to work? Every time I plot via X11 the machine
likes to hang for a 15 seconds ):
If no one has done this but has an idea about how to go about it I'd
be
This seems fixed in R-devel (r50493), and the fix will be included
in R-2.10.1
L.
Laurent Gautier wrote:
>
> As suspected this is a problem in the R function chisq.test()
> (and this also at the R level).
>
> https://stat.ethz.ch/pipermail/r-devel/2009-November/055701.html
>
>
>
> L.
>
As suspected this is a problem in the R function chisq.test()
(and this also at the R level).
https://stat.ethz.ch/pipermail/r-devel/2009-November/055701.html
L.
Laurent Gautier wrote:
> This is odd.
> When looking at what is happening, the problem is likely rooted in
> the use of deparse(
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