RE: Unit cell accessible volume

2015-06-19 Thread Radovan Cerny
an Al Bahri Cc : rietveld_l@ill.fr; rietveld_l-requ...@ill.fr; jordi.r...@icmab.es Objet : Re: Unit cell accessible volume dear Othman, you might try a program called "buits" which allows, if I remember well, to define the radius of a "probe" used to fill up empty space with an

Re: Unit cell accessible volume

2015-06-18 Thread GREGORKIEWITZ MICHAEL
dear Othman, you might try a program called "buits" which allows, if I remember well, to define the radius of a "probe" used to fill up empty space with an irregular surface. The reference is Jordi Rius. J Appl Cryst (1991) 24, 187-189. We used this program to determine void volumes in ioni

Re: Unit cell accessible volume

2015-06-10 Thread Leonid Solovyov
>I am, however, interested in finding out >whether inserting certain molecules >in the voids (without distorting the structure) >is geometrically possible. You may use FOX: http://fox.vincefn.net/ There you can insert guest molecules into the structure cell, set up their flexibility (or use as ri

Re: Unit cell accessible volume

2015-06-10 Thread Lubomir Smrcok
Hi, Platon provides a reliable estimate of volumes of voids. However, it does not, in fact it can't, tell you more about their shapes. But what is known are approximate volumes taken in structures by typical molecules, mostly by solvents. Of course, some flexible molecules could happen to be a

RE: Unit cell accessible volume

2015-06-10 Thread Alan Coelho
Hi Othman >I am, however, interested in finding out whether inserting certain molecules in the voids >(without distorting the structure) is geometrically possible Use distance penalties/restraints such anti-bumping etc. and then minimize on the restraints/penalties by refining the molecul