cience
University of Toronto
From: Mauricio Vargas Sepulveda
Sent: November 15, 2024 7:16 AM
To: Ivan Krylov
Cc: r-package-devel@r-project.org
Subject: Re: [R-pkg-devel] Possible false negative for compiled C++ code in
CRAN checks
Dear R Developers,
I impl
On 15 November 2024 at 12:16, Mauricio Vargas Sepulveda wrote:
| [...] and I now asked Dr. Ligges for the possibility to know more about the
CRAN specific configuration to add it to R-Hub.
It is (and has always been) documented in a text file on the server
https://www.stats.ox.ac.uk/pub/bd
o Vargas Sepulveda
Cc: r-package-devel@r-project.org
Subject: Re: [R-pkg-devel] Possible false negative for compiled C++ code in
CRAN checks
В Thu, 14 Nov 2024 16:24:16 +
Mauricio Vargas Sepulveda пишет:
> After enabling the SAN flags, I cannot reproduce the gcc-san error
> [2].
Can
В Thu, 14 Nov 2024 16:24:16 +
Mauricio Vargas Sepulveda пишет:
> After enabling the SAN flags, I cannot reproduce the gcc-san error
> [2].
Can you use the rocker/r-devel-san container? It reproduces the problem
for me.
When reading galapagos/cg15.dic, FuzzyEntityParser::ParseEntities()
keep
On 14 November 2024 at 16:24, Mauricio Vargas Sepulveda wrote:
| After enabling the SAN flags, I cannot reproduce the gcc-san error [2].
|
| Should I report this as a false positive?
No.
Replicating ASAN/UBSAN issues is known to be potentially tricky.
It drove me so batty a decade ago that I
3:37 PM
To: Mauricio Vargas Sepulveda
Cc: r-package-devel@r-project.org
Subject: Re: [R-pkg-devel] Possible false negative for compiled C++ code in
CRAN checks
В Tue, 12 Nov 2024 17:37:40 +
Mauricio Vargas Sepulveda пишет:
> I re-sent my package and I still see:
>
> 1.
>
В Tue, 12 Nov 2024 17:37:40 +
Mauricio Vargas Sepulveda пишет:
> I re-sent my package and I still see:
>
> 1.
> https://win-builder.r-project.org/incoming_pretest/redatam_2.0.3_20241112_165458/specialChecks/clang-san/outputs.txt
I understand this doesn't feel like progress, but this time
Science
University of Toronto
From: Mauricio Vargas Sepulveda
Sent: November 12, 2024 11:01 AM
To: Ivan Krylov
Cc: r-package-devel@r-project.org
Subject: Re: [R-pkg-devel] Possible false negative for compiled C++ code in
CRAN checks
Dear Prof. Dr. Kryov,
Than
"Pachá" Vargas Sepúlveda
PhD Student, Political Science
University of Toronto
From: Ivan Krylov
Sent: November 12, 2024 5:56 AM
To: Mauricio Vargas Sepulveda
Cc: r-package-devel@r-project.org
Subject: Re: [R-pkg-devel] Possible false negative
В Tue, 12 Nov 2024 04:02:17 +
Mauricio Vargas Sepulveda пишет:
> For v2.0.3 I implemented a full refactor, where I simplified the code
> considerably while trying to solve what looks to be a false positive.
>
> Now I implemented a "patch" based on the suggestion:
I see the change on GitHub
free
==4218==HINT: if you don't care about these errors you may set
ASAN_OPTIONS=alloc_dealloc_mismatch=0
==4218==ABORTING
2 errors ✖ | 0 warnings ✔ | 2 notes ✖
Error: R CMD check found ERRORs
——
Mauricio "Pachá" Vargas Sepúlveda
PhD Student, Political Science
University of
of Toronto
From: Ivan Krylov
Sent: November 11, 2024 4:48 AM
To: Mauricio Vargas Sepulveda
Cc: r-package-devel@r-project.org
Subject: Re: [R-pkg-devel] Possible false negative for compiled C++ code in
CRAN checks
[You don't often get email from ikry...@disroot.org. Learn why thi
Dear Mauricio Vargas Sepulveda,
Welcome to R-package-devel!
В Sat, 9 Nov 2024 17:34:07 +
Mauricio Vargas Sepulveda пишет:
> CRAN reported memory leaks for:
>
> CLAN/ASAN:
> https://www.stats.ox.ac.uk/pub/bdr/memtests/clang-ASAN/redatam/00check.log
> CLANG/UBSAN:
> https://www.stats.ox.ac.u
Dear Developers,
I am writing to ask for insights on how to fix the errors in the Redatam
package and get it back to CRAN.
CRAN reported memory leaks for:
CLAN/ASAN:
https://www.stats.ox.ac.uk/pub/bdr/memtests/clang-ASAN/redatam/00check.log
CLANG/UBSAN:
https://www.stats.ox.ac.uk/pub/bdr/mem
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