Re: [R-pkg-devel] Possible malware(?) in a vignette

2024-01-27 Thread Bob Rudis
; one, knowing what kind would help to see how any other instances could be >> detected. Please contact the CRAN team if you have any such information and >> we can take it from there. >> >> As you hinted yourself - there is no such thing as absolute safety - as >> the we

Re: [R-pkg-devel] Possible malware(?) in a vignette

2024-01-27 Thread Bob Rudis
The current one on CRAN does get flagged for some low-level Sigma rules b/c of one of way a few URLs interact. I don't know if f-secure is pedantic enough to call that malicious (it probably is, though). The *current* PDF is "fine". There is a major problem with the 2020 version. The file Iñaki's

[R-pkg-devel] log4j (CVE-2021-44228) & rJava CRAN pkgs (spoiler: no issues!)

2021-12-12 Thread Bob Rudis
Hey folks, If you haven't heard abt the log4j vuln from Friday yet, I envy you and def want to know how you managed to do that. For folks who develop Java-backed packages, pls be aware there's an arbitrary code execution issue with log4j v2 <= 2.15.0 (NOTE log4j v1 1.x are not impacted). Thanks

Re: [R-pkg-devel] MacOS flat namespace

2020-05-11 Thread Bob Rudis
Can you provide a bit more context? I just grabbed the pkg source from CRAN and it builds fine. $ clang --version Apple clang version 11.0.3 (clang-1103.0.32.59) Target: x86_64-apple-darwin19.5.0 Thread model: posix InstalledDir: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefa

Re: [R-pkg-devel] Internet security software?

2020-02-29 Thread Bob Rudis
As someone who is in cybersecurity as their $DAYJOB and who runs macOS as their primary OS (tho I pretty much run them all in one way, shape or form), I'd suggest: - relying heavily on Gatekeeper/Xprotect (the built-in anti-malware solution that comes with macOS, provided you keep updating the

Re: [R-pkg-devel] Checking for future file timestamps - warning with worldclockapi HTTP status 403 Site Disabled

2019-03-07 Thread Bob Rudis
the release branch) > > The timestamp checking code is still present in R-devel. I presume something > needs to be done about the breakage. > > - pd > >> On 7 Mar 2019, at 14:38 , Bob Rudis wrote: >> >> It's fixed in the RC that's GA on the 11th. >&g

Re: [R-pkg-devel] Checking for future file timestamps - warning with worldclockapi HTTP status 403 Site Disabled

2019-03-07 Thread Bob Rudis
It's fixed in the RC that's GA on the 11th. I think perhaps "stealth fixed" may be more appropro since it's not in SVN logs, Bugzilla nor noted prominently in any of the various NEWS* files. Then there's the "why was the core R installation using a third party, non-HTTPS site for this to begin

Re: [R-pkg-devel] registering native routines

2019-02-18 Thread Bob Rudis
I believe you've got _some_ time. As of the changes in 3.4.0 the verbiage is: R CMD check --as-cran now NOTEs if the package does not register its native routines or does not declare its intentions on (native) symbol search. (This will become a WARNING in due course.) And I think it's

[R-pkg-devel] New libcurl coming / question for pkg authors

2016-10-21 Thread Bob Rudis
(didn't know where else to post this, but pkg authors seemed to be a good group to run this by) Some folks may know I work in cybersecurity and my org's been talking with the curl/libcurl community regarding: https://curl.haxx.se/mail/lib-2016-10/0076.html TLDR: there's a new libcurl/curl coming

Re: [R-pkg-devel] automated testing for an SSH tunneling package?

2016-09-16 Thread Bob Rudis
I'm not sure where Jeroen is on this - https://github.com/jeroenooms/ssh - but it might make more sense to dovetail off of it than rely on binaries being available on systems. That's doable, but (IMO) fraught with peril. On Fri, Sep 16, 2016 at 4:53 PM, William May wrote: > I wrote an SSH tunnel

Re: [R-pkg-devel] robust download function in R (similar to wget)?

2016-08-25 Thread Bob Rudis
libcurl (which the RCurl & curl packages are built on) do not inherently have retry or resume partial capabilities, but those could be packaged up into a "robustdownloader" package. There's no guarantee of wget or curl binaries being on a system (especially Windows, even with an Rtools installation

Re: [R-pkg-devel] [Learning] the secret of Win[dows C-backed packages]

2016-08-13 Thread Bob Rudis
Aye. I rly need to get back to my security & privacy "R" post. The slipstreaming in of these binaries is somewhat frightening. Almost as frightening as being stuck on Windows 😀 On Sat, Aug 13, 2016 at 13:09 Dirk Eddelbuettel wrote: > > I don't think there is a good "generally applicable" solution

[R-pkg-devel] [Learning] the secret of Win[dows C-backed packages]

2016-08-13 Thread Bob Rudis
Hey folks, I usually stare in awe at the C-backed packages that rely on eternal libraries which are super-easy to get working on macOS & *nix _but_ that also work perfectly on Windows. I fire up Windows (*maybe*) once a month to test some of my packages but I'm curious as to what I need to do to s

Re: [R-pkg-devel] Would CRAN accept a package that requires cmake?

2016-08-10 Thread Bob Rudis
qtbase - https://cran.rstudio.com/web/packages/qtbase/index.html - is just one (quickly found) example of pkgs using cmake. the installr pkg will enable folks to install cmake on windows pretty easily, as well. On Wed, Aug 10, 2016 at 8:39 AM, Charles Determan wrote: > Greetings, > > I have seen

Re: [R-pkg-devel] Pkgs with ToS violations

2016-08-04 Thread Bob Rudis
AN will follow up with the package maintainer. > > Best, > Uwe Ligges > > > > On 04.08.2016 10:50, peter dalgaard wrote: >> >> >> On 04 Aug 2016, at 05:21 , Dirk Eddelbuettel wrote: >> >>> >>> On 3 August 2016 at 22:26, Bob Rudis wrot

[R-pkg-devel] Pkgs with ToS violations

2016-08-03 Thread Bob Rudis
I came across https://cran.rstudio.com/web/packages/boxoffice/index.html in CRAN today and while I don't expect CRAN to be a legal authority, should there not be some kind of policy for excluding R packages that deliberately violate (data) site ToS? (I'm asking this here vs sending a note to CRAN f

Re: [R-pkg-devel] What to do when you can't reproduce CRAN R CMD check unit test failures?

2016-05-12 Thread boB Rudis
against R-devel. >> >> Though it seems that in this case, all the tests are passing there too. >> >> http://win-builder.r-project.org/21kc9XGKdANF/examples_and_tests/tests_i386/testthat.Rout >> http://win-builder.r-project.org/21kc9XGKdANF/examples_and_tests/tests_x64/t

Re: [R-pkg-devel] What to do when you can't reproduce CRAN R CMD check unit test failures?

2016-05-11 Thread boB Rudis
did you try winbuilder R-devel? I occasionally (ok, often) forget to do that and it sometimes kick out different errors than R-devel on local systems. On Wed, May 11, 2016 at 2:40 AM, Richard Cotton wrote: > Yesterday I uploaded a new version of the pathological package to > CRAN. It was initial

Re: [R-pkg-devel] Submitting CRAN packages with hard-to-meet dependencies

2016-04-18 Thread boB Rudis
)? Package complexities are only going to grow, not shrink. Such is this brave, new data science world we live in. On Mon, Apr 18, 2016 at 8:36 PM, Dirk Eddelbuettel wrote: > > My $0.02: > > On 18 April 2016 at 20:23, boB Rudis wrote: > | I would hope CRAN would let this in with some vali

Re: [R-pkg-devel] Submitting CRAN packages with hard-to-meet dependencies

2016-04-18 Thread boB Rudis
I would hope CRAN would let this in with some validation (even to the point of it possibly adding a new field to DESCRIPTION). It may never run on Slolaris or Plan 9, and I - who now runs a CRAN mirror in the hopes to eventually have a MacBuilder equivalent service at some point in the near future

Re: [R-pkg-devel] Is it possible to protect a word from the spell checker?

2016-03-06 Thread boB Rudis
Is there a minimum length req for the single quote spell checker firewall? I've been putting 'API' in proper single quotes and it always gets flagged. On Sun, Mar 6, 2016 at 11:08 AM, Michael Dewey wrote: > Thanks to all. I find it quite reassuring that even someone so steeped in R > is still fin

Re: [R-pkg-devel] Format/parser for NEWS (not NEWS.Rd)?

2015-10-07 Thread boB Rudis
Try looking at the source for tools:::.news_reader_default and then tools::toRd On Wed, Oct 7, 2015 at 8:37 PM, Henrik Bengtsson wrote: > Hi, > > I'm looking for a parser of the plain text NEWS format (not the > NEWS.Rd format) - ideally the same on that is used by R itself. Does > anyone know w

Re: [R-pkg-devel] DigitalOcean Makefiles for compiling R-devel

2015-07-22 Thread boB Rudis
I've got a Vagrant setup (I dislike Docker on OS X) that I'm nearly ready to push to github as well. Will post here once done. On Wed, Jul 22, 2015 at 6:45 PM, Jonathan Callahan wrote: > All, > > We have (finally) started testing our packages with r-revel on Digital > Ocean virtual machines. > >