Kevin,
thanks, that's very helpful! So this is a serious bug in rstan - apparently
they only do that on macOS which explains why other platforms don't see it:
.onLoad <- function(libname, pkgname) {
[...]
## the tbbmalloc_proxy is not loaded by RcppParallel which is linked
## in by default
That shouldn't be happening, at least not by default. However, RcppParallel
does ship with tbbmalloc_proxy, which is a library that, when loaded, will
overload the default allocators to use TBB's allocators instead. The
intention is normally that these libraries would be loaded via e.g.
LD_PRELOAD
Nathan,
testthat is notorious for obfuscation and unhelpful output as can be clearly
seen in the head of testthat.Rout.fail:
> library(testthat)
> library(BCEA)
Attaching package: 'BCEA'
The following object is masked from 'package:graphics':
contour
>
> test_check("BCEA")
*** caugh
On Thu, 25 Nov 2021 12:33:01 +0100
Gábor Csárdi wrote:
> Are you sure about this? I don't think testthat hides any output. R
> CMD check on the other hand AFAICT only shows the last 13 lines by
> default. See the _R_CHECK_TESTS_NLINES_ environment variable in
> https://cran.r-project.org/doc/manu
On Thu, Nov 25, 2021 at 11:49 AM Ivan Krylov wrote:
>
> On Wed, 24 Nov 2021 16:37:44 + (UTC)
> Nathan Green via R-package-devel wrote:
>
> > An irrecoverable exception occurred. R is aborting now ...
>
> It seems that some of your dependencies which use compiled code
> manage to crash the R p
On Wed, 24 Nov 2021 16:37:44 + (UTC)
Nathan Green via R-package-devel wrote:
> An irrecoverable exception occurred. R is aborting now ...
It seems that some of your dependencies which use compiled code
manage to crash the R process on CRAN Mac machines. Since testthat
normally hides most out
Hi,
I've getting an ERROR when submitting a new release of our package BCEA to CRAN
which I'm having problems understanding and reproducing. Its passing CHECK
locally and GitHub Actions standard check
(https://github.com/n8thangreen/BCEA/actions/runs/1494595896).
The message is something to do w
