Re: [R-pkg-devel] Help Debugging Debian Error

2020-05-14 Thread Dirk Eddelbuettel
On 15 May 2020 at 02:30, Gábor Csárdi wrote: | It is unlikely that this is an R-hub issue because the first link is | CRAN's machine, and the same error happens there. My bad, sorry -- I read the original email(s) wrong. Dirk -- http://dirk.eddelbuettel.com | @eddelbuettel | e...@debian.org

Re: [R-pkg-devel] Help Debugging Debian Error

2020-05-14 Thread Paul Hibbing
Ah, I hadn't considered that the startup message could be the problem - I thought the point of startup messages was to be distinct from errors and warnings, so I wouldn't have expected that to trip up R CMD Check. I assumed the failure was occurring somewhere inside the actual code for my unit test

Re: [R-pkg-devel] Help Debugging Debian Error

2020-05-14 Thread Gábor Csárdi
Apparently, this is not a warning, but the package itself is printing it as a startup message: https://github.com/cran/PAutilities/blob/ada73d8d44177c12867cc385cdca0054885ddae3/R/zzz.R#L5 Gabor On Fri, May 15, 2020 at 2:30 AM Gábor Csárdi wrote: > > It is unlikely that this is an R-hub issue bec

Re: [R-pkg-devel] Help Debugging Debian Error

2020-05-14 Thread Gábor Csárdi
It is unlikely that this is an R-hub issue because the first link is CRAN's machine, and the same error happens there. I can reproduce it on macOS: git clone https://github.com/paulhibbing/PAutilities R CMD INSTALL PAutilities R -q -e 'packageDescription("PAutilities")$Built' #> > packageDescrip

Re: [R-pkg-devel] Help Debugging Debian Error

2020-05-14 Thread Dirk Eddelbuettel
On 14 May 2020 at 11:41, Paul Hibbing wrote: | * Here is the CRAN check (devel version 2020-05-13): | | https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-debian-gcc/PAutilities-00check.html | | * Here is the successful R-hub check (devel version 2020-05-10): | | https://artifacts.

[R-pkg-devel] package submission rejected "checking CRAN incoming feasibility ... NOTE"

2020-05-14 Thread RAFFELSBERGER Wolfgang (IGBMC)
Dear expeRts, when trying to submit a new package of mine, my submission was rejected during automic incoming checks. In fact on Windows it says Status: 1 NOTE This note says: * checking CRAN incoming feasibility ... NOTE Maintainer: 'Wolfgang Raffelsberger ' New submission On my previous s

Re: [R-pkg-devel] Help Debugging Debian Error

2020-05-14 Thread Paul Hibbing
* Here is the CRAN check (devel version 2020-05-13): https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-debian-gcc/PAutilities-00check.html * Here is the successful R-hub check (devel version 2020-05-10): https://artifacts.r-hub.io/PAutilities_1.0.0.tar.gz-43f919fd5595416799d74bfb312fd

[R-pkg-devel] Help Debugging Debian Error

2020-05-14 Thread Paul Hibbing
Hi all, At some point (I believe within the last week or so), my package `PAutilities` has developed the following error for r-devel-linux-x86_64-debian-gcc: * checking tests ... [3s/3s] ERROR Running ‘testthat.R’ [3s/3s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > libr

Re: [R-pkg-devel] MathJax for Rd files

2020-05-14 Thread Duncan Murdoch
On 14/05/2020 5:46 a.m., Gábor Csárdi wrote: On Thu, May 14, 2020 at 10:27 AM Duncan Murdoch wrote: On 14/05/2020 3:30 a.m., Georgi Boshnakov wrote: The issue is not with Rstudio per se but that in devtools' development mode help() is modified to show the Rd files in the source directory, a

Re: [R-pkg-devel] MathJax for Rd files

2020-05-14 Thread Georgi Boshnakov
I don't know if this helps but I have the following note in viewRd() (from 2017!) at https://github.com/GeoBosh/Rdpack/blob/81af94d0e690b9f02275e89d474ce184d63fb044/R/bib.R ... ## TODO: (BUG) e is NULL under RStudio e <- tools::loadPkgRdMacros(system.file(package = "Rdpack")) ## Rdo <-

Re: [R-pkg-devel] MathJax for Rd files

2020-05-14 Thread Duncan Murdoch
On 14/05/2020 5:46 a.m., Gábor Csárdi wrote: On Thu, May 14, 2020 at 10:27 AM Duncan Murdoch wrote: On 14/05/2020 3:30 a.m., Georgi Boshnakov wrote: The issue is not with Rstudio per se but that in devtools' development mode help() is modified to show the Rd files in the source directory, a

Re: [R-pkg-devel] MathJax for Rd files

2020-05-14 Thread Gábor Csárdi
On Thu, May 14, 2020 at 10:27 AM Duncan Murdoch wrote: > > On 14/05/2020 3:30 a.m., Georgi Boshnakov wrote: > > The issue is not with Rstudio per se but that in devtools' development mode > > help() is modified to show the Rd files in the source directory, as one > > would expect, but doesn't l

Re: [R-pkg-devel] MathJax for Rd files

2020-05-14 Thread Duncan Murdoch
On 14/05/2020 3:30 a.m., Georgi Boshnakov wrote: The issue is not with Rstudio per se but that in devtools' development mode help() is modified to show the Rd files in the source directory, as one would expect, but doesn't load the RdMacros. So, the issue appears when one is development mode.

Re: [R-pkg-devel] MathJax for Rd files

2020-05-14 Thread Georgi Boshnakov
The issue is not with Rstudio per se but that in devtools' development mode help() is modified to show the Rd files in the source directory, as one would expect, but doesn't load the RdMacros. So, the issue appears when one is development mode. Rdpack::viewRd() can be of some help but it curr