Re: [R-pkg-devel] memory exhausted (limit reached?) and R3.6.0 memory leak in data.table

2018-05-14 Thread luke-tierney
The issue with data.table in R 3.5 and R 3.6 is a race condition in data.table's use of multiple threads via OpenMP. Running with the environment variable OMP_NUM_THREADS=1 makes the memory problem go away. Calling DATAPTR for ALTREP objects, like compact arithmetic sequences, temporarily disable

[R-pkg-devel] memory exhausted (limit reached?) and R3.6.0 memory leak in data.table

2018-05-14 Thread Bailey, Paul
A package I'm submitting depends on data.table, which currently has a memory leak on Windows and so I'm getting rejected because of "memory exhausted (limit reached?)". I'm unsure how to proceed. It seems the issue is with R3.6.0 and data.table, so I don't think users would have an immediate iss

Re: [R-pkg-devel] Unable to build pdf manuals

2018-05-14 Thread Uwe Ligges
On 14.05.2018 09:16, Polychronis Kostoulas wrote: Dear colleagues, apologies if this is easy to solve but I am a rookie. I have developed an R package with three R functions. Everything works fine and the "check" is ok but I cannot find the pdf manual that is supposed to be generated from the R

[R-pkg-devel] Unable to build pdf manuals

2018-05-14 Thread Polychronis Kostoulas
Dear colleagues, apologies if this is easy to solve but I am a rookie. I have developed an R package with three R functions. Everything works fine and the "check" is ok but I cannot find the pdf manual that is supposed to be generated from the Rd files. I am using Rstudio. What am I missing? And