Dear R user,
I am a biochemist/bioinformatician, at the moment working on protein
clusterings by conformation similarity.
I only started seriously working with R about a couple of months ago.
I have been able so far to read my way through tutorials and set-up my
hierarchical clusterings. My probl
Dear Elai,
thank you very much for your suggestion. I tried cutting the dendrogram
instead of the hclust tree with:
clusters<-cut(x, h=1.6)
but then when I try to call/plot cluster 1 for example, with:
plot(clusters$lower[[1]])
I get only 2 members that are joined together at distance=0 (cluster
Ok, I was able to work it out finally.
As I have been aided myself numerous times from posted questions by other
users who have reached in the end a solution to their problem, I will put
the code that worked for me for future googlers - it is certainly not
optimal but it works:
# Initial clusterin
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