[R] how to map microarray probe to gene, homology

2012-04-03 Thread email mail
Hi: I have clustered microarray gene expression data and trying to map between microarray probe, gene, pathway, gene ontology, and homology for a set of (affy) microarray probes. Is there any package in R which facilitates this? I am looking at bioconductor, but till now could not find a solution.

[R] bayesian gene network construction

2012-04-11 Thread email mail
Hello: I have looked at the bnlearn and deal packages for infering bayesian network. Can anyone suggest any other suitable package for constructing bayesian gene regulatory network using gene expression data? Thanks! John [[alternative HTML version deleted]]