[R] lattice: loess smooths based on y-axis values

2013-01-18 Thread Raeanne Miller
Hi there, I'm using the lattice package to create an xy plot of abundance vs. depth for 5 stages of barnacle larvae from 5 species. Each panel of the plot represents a different stage, while different loess smoothers within each panel should represent different species. However, I would like d

Re: [R] lattice: loess smooths based on y-axis values

2013-01-18 Thread Raeanne Miller
it seems I can get the smooth the way I want it, with Depth on the y axis and abundance on the x axis. Hope that is useful for anyone else interested - and Bert, thanks again for the swift reply! Raeanne -Original Message- From: Bert Gunter [mailto:gunter.ber...@gene.com] Sent: 18 Jan

[R] metaMDS with large dataset produces 'insufficient data' warning

2013-05-27 Thread Raeanne Miller
Greetings everyone, I am running MDS on a very large dataset (12 x 25071 - 12 model runs with 25071 output values each), and also on a very much reduced version of the dataset (randomly select 1000 of the 25071 output values). I would like to look at similarities/dissimilarities between the 12

[R] COZIGAM removed from CRAN

2012-12-14 Thread Raeanne Miller
Hi All, Another quick question - I noticed that COZIGAM has been removed from CRAN, and that you are referred to the archive for previous versions (last updated 23 July 2012). Is this package still ok to use? Or is there an alternative which might also fit zero-inflated GAMs? Thanks, Raeanne