[R] need help to generate an intersection matrix

Dear all, I am new to r script and run into some difficulty with this simple task. Here is my data: I need to find out the number of mutual intersected elements as shown below data pathway1 A B C D E pathway2 A C

[R] A general question about targeted sequencing data analysis

Dear all, One of our PIs has a targeted sequencing dataset generated a while ago. He is interested in finding out VAF of a group of genes. This is the first dataset of this types we have. I would be appreciative for any suggestions on pipelines for analyzing this type of data. Thanks Anna

Re: [R] [EXTERNAL] Re: A question of data frame filter based on another one

Hi Eric, Thanks for your quick response. It works. Have a nice weekend! Aiguo From: Eric Berger Date: Friday, February 18, 2022 at 3:35 PM To: "Li, Aiguo (NIH/NCI) [E]" Cc: "r-help@r-project.org" Subject: [EXTERNAL] Re: [R] A question of data frame filter based on

[R] A question related to extracting peptides from indels for mouse

Dear all, I need to extract peptides from a long list of indels of mouse for neoantigen analysis. Does anyone know a tool that will do it? Thanks, Anna [[alternative HTML version deleted]] __ R-help@r-project.org mailing list -- To UNSUBSCR