The unequivocal answer is that it is possible, and most likely you have bad
data or are referring to an incomplete lookup table.
For us to see what your problem is would rewquire a reproducible example, but
what you have provided is not reproducible [1][2][3].
[1]
http://stackoverflow.com/que
I recommend that Maria read [1], [2] and especially [3], since the latter helps
you verify that your example is in fact reproducible before sending it out for
us to have problems with and complain about.
[1]
http://stackoverflow.com/questions/5963269/how-to-make-a-great-r-reproducible-example
No-one is preventing you from unsubscribing, and we are not empowered to do it
for you. Follow the instructions at the bottom of this and every posting on
this list.
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On September 12, 2017 7:57:25 AM PDT, Where's YK wrote:
>Thank you.
>
>from ca
It contains the output of one call to dput, but several objects were missing
and the name of the object provided in the text file was not specified.
--
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On September 12, 2017 10:22:36 AM PDT, Michael Dewey
wrote:
>Dear Maria
>
>The file you attache
The messages tell you that the package files were successfully downloaded and
extracted, but could not be added to the package library. Try making sure all
instances of R are closed down before running the install.packages function.
Also, just to be clear, avoid running R "As Administrator" unde
The messages tell you that the package files were successfully downloaded and
extracted, but could not be added to the package library. Try making sure all
instances of R are closed down before running the install.packages function.
Also, just to be clear, avoid running R "As Administrator" unde
I think you should consider whether the advantages of making an object-aware
collections class are worth the effort... lists are the standard tool for this
task in R, and are normally handled using the functional programming paradigm.
Just make sure a sufficiently-complete set of methods are ava
Should also make the example reproducible [1][2][3] when you do post there
because some mismatch between the model and the data is frequently where the
problem turns out to be, and without an example that triggers the problem it is
very tough to figure that out.
[1]
http://stackoverflow.com/q
No. However, you can modify the global environment from within a function if
you understand how variable scoping works. [1] See `<<-`. Be warned that this
leads down a perilous path of confusing code (side effects) if misused.
[1] http://adv-r.had.co.nz/Environments.html
--
Sent from my phone.
These environment variables are _inputs_ to the R startup sequence, and
optional ones at that. If you don't set them then R makes default settings.
Read the R Installation and Administration manual that comes with R for more
information.
You also need to understand the scope of environment var
"Label" is not a clear term for data frames, but most data frames have
rownames. If dta is a data frame, not a tibble,
rownames( dta )[ !duplicated( dta ) ]
Or could use row indexes directly
which( !duplicated( dta ) )
--
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On September 18, 2017 6
Greg, I think you should stop using noquote, because it is doing something that
will not be useful to you for preparing your data for analysis.
Please follow Duncan's advice and provide us with a sample of your data. Also,
please set your email program to send plain text rather than HTML format
This practice is not portable, as not everyone's default file creation
permissions allow others to read those files, so putting them outside your home
directory isn't necessarily helpful. It is much better to use the default user
library within your home directory as suggested by the R install p
... which begs the question... how does the my.env variable get from the myApp
function into the server function?
Perhaps read [1]?
[1] https://shiny.rstudio.com/articles/function.html
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On September 21, 2017 8:13:15 AM PDT, Thierry Onkelinx
wr
FYI: Most files you might attach to an email sent to the mailing list will not
transmitted to us due to virus propagation policies of the mailing list (they
are removed see the Posting Guide). The best method for sharing binary
files is to to put them on a website like Dropbox or Google Driv
Still failed.
The first secret is in your email program settings, to use Plain Text format
(at least for emails you send to this mailing list).
The second secret tool to use is the reprex package to let you verify that your
code example will do on our computers what it is doing on your compute
The use of aperm is unnecessary if you call array() properly.
ms <- array(c(rep(0, 5),so,sa*m,sa), c(5, 2, 2))
--
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On September 28, 2017 9:10:26 AM PDT, Evan Cooch wrote:
>Sure -- thanks -- only took me 3-4 attempts to get aperm to work (as
>oppose
All HTML emails have a plain text part along with the HTML part... but it is
usually invisible to the author and is automatically generated by the email
composing software and some software is better than others at that job (by a
lot). However, without a doubt, sending the email in text form at
You are asking about (a) a contributed package (b) for a package version that
is not in CRAN and (c) an R version that is outdated, which stretches the
definition of "on topic" here. Since that function does not appear to have been
removed from that package (I am not installing a development ver
I tend to regard GitHub as a bit of wild west... anyone can upload anything
there, working or not. CRAN packages at least have to compile so there is some
additional verification in being there.
GitHub does have the advantage that you can easily download it and run an
example if the authors hav
You won't deliver your question successfully to the mailing list if you don't
follow the Posting Guide, particularly with regard to attachments. The most
reliable way is to include your question in the text of your PLAIN TEXT format
email with no attachments. Yes, there is an option in Gmail to
Change the columns into factors before you give them to the coxph function, e.g.
df$treatment <- factor( df$treatment )
--
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On October 7, 2017 5:01:19 PM GMT+01:00, "Ted Beginner (RStudio) via R-help"
wrote:
>
>For adjusted survival curves I took t
data_2 <- read.csv("excel_data.csv",stringsAsFactors=FALSE)
column_1 <- data_2$data1
column_2 <- data_2$data2
result <- match( column_1, column_2 )
Please read the Posting Guide mentioned at the bottom of this and every
posting, in particular about posting plain text so that what we see will be
Off topic. Read the Posting Guide.
--
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On October 14, 2017 11:02:50 AM GMT+01:00, Stephen Berman
wrote:
>On Fri, 13 Oct 2017 22:36:48 +0200 Stephen Berman
> wrote:
>
>> I just built the latest R-patched from source (SVN-Revision: 73548,
>Last
>> Chan
.
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On October 14, 2017 12:07:37 PM GMT+01:00, Stephen Berman
wrote:
>On Sat, 14 Oct 2017 11:49:16 +0100 Jeff Newmiller
> wrote:
>
>> Off topic. Read the Posting Guide.
>
>I did do that before posting; the choice seemed to be betwe
(Re-)read the discussion of indexing (both `[` and `[[`) and be sure to get
clear on the difference between matrices and data frames in the Introduction to
R document that comes with R. There are many ways to create numeric vectors,
character vectors, and logical vectors that can then be used as
?tryCatch
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On October 20, 2017 7:37:12 AM PDT, Evangelina Viotto
wrote:
>Hello I´m need fitt growth curve with data length-age. I want to
>evaluate
>which is the function that best predicts my data, to do so I compare
>the
>Akaikes of different mo
What time zone are these data in? Does daylight savings adjustment apply?
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On May 22, 2016 9:48:08 AM PDT, Bhaskar Mitra wrote:
>Hello,
>
>My apologies for the earlier posting. There was an error with regard to
>my
>query :
>
>
>I am trying to mer
outer( p, a )
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On May 22, 2016 3:34:31 PM PDT, Jim Lemon wrote:
>Hi Steven,
>
>as.data.frame(sapply(a,"*",p))
>
>Jim
>
>
>On Mon, May 23, 2016 at 8:22 AM, Steven Yen wrote:
>> Dear R users:
>>
>> > # p is a vector if length 10
>> > # a is a vect
I am not familiar with any function called "toFactor". It may be part of some
contributed package that you need to re-load.
However, one does not ordinarily need to use a package to convert one column of
a data frame into a factor, since factors are supported by base R.
Eg
MyDF$ID <- factor(
Perhaps
ds_example <- ds_example[ with( ds_example, 1 < ave( Debitor, Debitor,
FUN=length ) ), ]
--
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On May 23, 2016 6:57:04 AM PDT, g.maub...@weinwolf.de wrote:
>Hi All,
>
>the solution for my question is as follows
>
>## Filter duplicates and corr
Scalar values in R are just vectors of length 1. The "promotion" you are
thinking of is "recycling" that automatically occurs when vectors of different
lengths are supplied to certain operations.
One shortcut might be to put them all into a data frame using the data.frame()
function. Otherwis
would warn against using POSIXlt for
merging, though, for poor efficiency reasons.
On Mon, 23 May 2016, Bhaskar Mitra wrote:
Dear Jeff,
Time zone is UTC. No, daylight savings time does not apply.
regards,
bhaskar
On Sun, May 22, 2016 at 4:10 PM, Jeff Newmiller
wrote:
What time zone are the
This is almost certainly a message from a contributed package, not from R
itself. Please figure out which package you are using and read the
documentation for that package.
--
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On May 23, 2016 1:37:22 PM PDT, Fabian Schalle
wrote:
>Hello,
>I’ve n
This is a design feature of data.table objects, which don't conform to the
normal functional programming paradigm that R is usually designed to adhere to
and which Reduce expects. Specifically, they normally modify in-place rather
than leaving the original object alone.
In short, don't do that
You forgot to show the commands to us that you used to read the data in with
(your example is not "reproducible"). This step can make all the difference in
the world as to whether your analysis commands will work or not.
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On May 25, 2016 11:59:06
excuse my brevity.
On May 25, 2016 2:26:54 PM PDT, James Henson wrote:
>Good afternoon Jeff,
>The sample sizes for levels of the factor "Irrigation" are not equal.
>If
>'nlme' requires equal sample sizes this may be the problem. The same
>data
>frame runs in &
rg/posting-guide.html
<http://www.r-project.org/posting-guide.html>
and provide commented, minimal, self-contained, reproducible code.
__
R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see
https://stat.ethz.ch/mailman/listinfo/r-help
What about just
diff( dts )
or
as.numeric( diff( dts ), units="days" )
?
--
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On May 26, 2016 5:09:20 PM PDT, "MacQueen, Don" wrote:
>You want the number of days between dates?
>Does this do the trick?
>
>dts <- Sys.Date()+ c(1,2,3,5,6,9)
>dts[-1]
I think you need to read those questions again more carefully... particularly
the second one.
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On May 27, 2016 7:41:25 AM PDT, "ch.elahe via R-help"
wrote:
>Thanks Ulrik,
>But in these examples they want to mark the percentage or frequency of
>p
If you read the Posting Guide it warns you against posting in HTML (it doesn't
say why but basically what you think you sent is not necessarily what we saw).
It also mentions that you should update to the latest version of R (yours is
not) if you want help (though we might try anyway). It also m
again.
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On May 27, 2016 11:45:38 AM PDT, Lida Zeighami wrote:
>Thank you Jeff for your reply,
>
>I've run install.packages( "pcalg" ) in my R version 3.1.3 but got
>error:
>
>- package âpcalgâ is not available (f
You have set yourself an impossible goal. Either you can reformulate your
problem as non-iterative and can process your data as arrays, or you have to
use some kind of for loop. The lapply and Vectorize functions are popular
"pretty" ways to do this, but they amount to hidden for loops.
Note t
Your rather sarcastic comment about knowledge given by John's mother seems
inappropriate, given that he told you where his information came from and it is
the first place you should have looked.
The bit about the decimal leading to a shift in the decimal place pointed out
by Bill is a bit obsc
This sounds like homework, which has been determined to be off-topic on this
help list. Please read the Posting Guide before posting.
That said, it would appear the OP may need to read about data frames in, say,
the Introduction to R... and perhaps about matrices... and using the as.*
function
If you don't mix the text and color, heatmaps are pretty standard presentation
techniques.
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On May 28, 2016 7:41:53 AM PDT, Bert Gunter wrote:
>Hi Naresh:
>
>I shall be brief, as discussions of what statistical/graphical
>techniques
>to use are l
Apparently you need to get your Java runtime setup, or install Perl, depending
which of these tools you want to use.
Or if your data are laid out simply, you might be able to use the readxl
package.
--
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On May 28, 2016 10:55:50 AM PDT, li li wrot
tat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
---
Jeff Newmiller
Why do you want to do this?
--
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On May 27, 2016 4:00:14 PM PDT, Santosh wrote:
>Dear Rxperts!
>
>Is there a way to compute relative values.. using within().. function?
>
>Any assistance/suggestions are highly welcome!!
>Thanks again,
>Santosh...
>
z %% 2 == 1
has 12 logical values. What do you expect R to do with it worth respect to 4
rows?
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On May 30, 2016 11:38:46 AM PDT, Carl Sutton via R-help
wrote:
>Hi Guru's
>In my quest to understand R I have what I thought was a simple exercise
al water year
result <- 0 == wy1
# if last day is not Sep 30, mark last water year as partial
if ( 8 != dtl$mon[ length( d ) ]
| 30 != dtl$mday[ length( d ) ] ) {
result[ wy1[ length( d ) ] == wy1 ] <- TRUE
}
result
}
dat2 <- dat[ !isPartialWaterYear( dat$Date ), ]
On
e
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
---
Jeff Newmiller
BE and more, see
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
---
Jeff NewmillerThe .
You were clearly mistaken.
dataframe$column is almost the same as dataframe[["column"]], except that the $
does partial matching. Both of these "extract" a list element.
A data frame is a list where all elements are vectors of the same length. A
list is a vector where each element can refer
Assume everyone will begin their work in a suitable working directory for their
computer. Put data in that working directory or some directory "near" it. Then
use relative paths to the data instead of absolute paths (don't use paths that
start with "/"). I usually start by reading in a "configur
In every activity, knowing something about it allows you to avoid repeating the
mistakes of the past. There are non-statistical uses of programming languages,
so you could use it for domains you are familiar with. Or you could see some
intriguing statistical analysis and study in that area to un
What is complicated about merge( q, r )?
Keep in mind that there is nothing simple about the rules for non-standard
evaluation of variables that within() uses, and it only gets more complicated
if you try to apply those rules to two data frames at once. While I am not
quite sure I understand wh
t;within" function,
>is
>pretty straight forward.. At times there are situations when many, if
>not
>all, of the operations are needed to be done within the scope the
>"within"
>environment..
>
>Thanks so much..
>Regards,
>Santosh
>
>On Tue, May 31
phone. Please excuse my brevity.
On May 31, 2016 6:26:31 PM PDT, Val wrote:
>Thank you so much Jeff. It worked for this example.
>
>When I read it from a file (c:\data\test.txt) it did not work
>
>KLEM="c:\data"
>KR=paste(KLEM,"\test.txt",sep="")
>i
You did not send sample of your data, using dput. Before doing that, I
suggest peeling apart your troublesome line of code yourself:
str( as.matrix( scale( subdf ) ) )
str( scale( subdf ) )
str( subdf )
And then think about what the scale function does. Does it make sense to ask it
to scale c
Beware of getting too "meta" in your programming... it is rarely worth it. Just
write the code and move on with life. That is the beauty of a scripting
language.
--
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On June 1, 2016 7:30:29 PM PDT, ce wrote:
>
>Dear all,
>
>I want to make an if con
The answer to your question is "yes".
You probably need to make your example reproducible by including (or
referencing by URL) sample data if you want a more complete response.
--
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On June 2, 2016 1:42:55 AM PDT, Miluji Sb wrote:
>Dear all,
>
>I ha
?merge
Pay attention to the all-whatever parameters.
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On June 2, 2016 7:04:47 PM PDT, Ashta wrote:
>I have 2 data sets. File1 and File2. Some records are common to both
>data sets. For those common records I want get the difference between
>d_x1
The median is not always a member of the data set. What do you really want?
I for one would want people to follow the guidance in the footer on every email
on this mailing list.
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On June 4, 2016 9:01:41 AM PDT, Gafar Matanmi Oyeyemi
wrote:
>De
The help file ?dmvnorm is your friend. Read about "x".
ghv <- matrix( gh[ as.vector( idx ) ], ncol = dm )
adjFactor2 <- dmvnorm( ghv, mean = mu, sigma = sigma )
--
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On June 7, 2016 10:19:53 AM PDT, "Doran, Harold" wrote:
>Thanks, Duncan. Not sure I f
I would echo the suggestion that the knitr Google group or stackexchange.com
would be better than this list for this question. I also suggest that you look
at http://yihui.name/knitr/demo/child/ and make a reproducible example if you
decide to ask for more help in one of those forums.
--
Sent
The canonical way to store times is as difftime vectors. However, there is no
simple way to import e.g. HH:MM data directly into such vectors, so you need to
embed such times into a longer string that includes a fixed date. After
conversion to POSIXct you can subtract the fixed date to get the
1. Don't allocate it.
2. If it was, would it make a difference?
Seriously, some algorithms need more memory than others, and some packages are
more wasteful than others. R is not monolithic... sometimes you just have to
roll up your sleeves or buy more memory.
--
Sent from my phone. Please
Re this thread: Please stop with the "my favorite Linux" messages. If you have
concrete direction as to why R is well supported (preferably links to detailed
instructions), that could be construed as "R-help", but "I like it" is unlikely
to be useful to an inexperienced user.
--
Sent from my ph
Multiple posting happens when you are learning a new system, but reading the
posting guide can keep the bleeding down.
1) There is a no-homework policy on this list... different educational
organizations have different standards for what is acceptable outside help, so
you should be using the s
This is not a reproducible example, and posting in HTML format frequently
corrupts R code so don't do it.
--
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On June 11, 2016 11:15:38 AM PDT, thanoon younis
wrote:
>Dear R- users
>
>I have a problem in the R-code, i want to draw some plots in R,h
/
--
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On June 11, 2016 11:36:58 AM PDT, thanoon younis
wrote:
>Thank you very much for your response, how can i solve this problem, i
>want
>to draw at least BGR plots?
>
>
>Regards
>
>On 11 June 2016 at 21:33, Jeff Newmiller
e:
Ok.
Instead of explaining what you have, please send a result of
dput(B) and dput(A)
And set you mail client to send plain text mail otherwise your code is barely
readable.
What do you want to do with printed values?
What is B? From this it seems that it is data frame but then you try
__
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
---
Looks like you forgot to read the Posting Guide, too.
--
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On June 14, 2016 6:30:23 AM PDT, "T.Riedle" wrote:
>Sorry, I forgot to attach the file.
>
>
> Dear R users,
>I have not received any help regarding my p
I have never used that package, but the error message seems clear. You need to
use the correct arguments to the setup_twitter_oauth function, and that
requires that you interact with twitter parsonally to obtain appropriate
credentials. While someone here may be able to give you a pointer as to
This is mostly a domain-specific question about coordinate conversion and
algebra, not really about R. However, there are packages that could be useful
for this problem that are discussed in the CRAN "Analysis of Spatial Data" Task
View [1] and on the R-sig-geo mailing list [2].
Some points to
You should look at your own data before you post. The information in COUNTRY is
not the same as the information in region.
Also, dput is better than str for posting questions.
--
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On June 17, 2016 1:06:29 PM PDT, "ch.elahe via R-help"
wrote:
>Hi a
Your code is corrupt because you failed to send your email in plain text
format.
You also don't appear to have all data needed to reproduce the problem. Use the
dput function to generate R code form of a sample of your data.
--
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On June 17, 2016 1
Not reproducible. Use dput to generate R code form of your data along with the
code that gave you the error, and set the email to plain text only when you
send it so it doesn't get corrupted when the html is stripped on the mailing
list.
--
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On Jun
of Error.func, and the call to optim if you do it right.
[1]
http://stackoverflow.com/questions/5963269/how-to-make-a-great-r-reproducible-example
--
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On June 17, 2016 3:10:41 PM PDT, Narendra Modi wrote:
>how to do that Jeff? I am newbie to R.
&g
ata.matrix.time,
my.data.matrix.inj,
my.data.matrix.prod,my.data.var,my.data.var.mat)
diff.values <- my.data.matrix.prod-Calc.Qjk.Value#FIND
DIFFERENCE BETWEEN CAL. MATRIX AND ORIGINAL MATRIX
Error <- ((colSums ((diff.values^2), na.rm = FALSE, dims =
1)
Not my problem. You are the one applying constraints.
--
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On June 21, 2016 1:13:35 PM PDT, Priyank Dwivedi wrote:
>Thank you Jeff.
>It seems to definitely solve it but the "total_error" is very high.
>Around 399.
>I also trie
This is normal. R is a (mostly) functional language, which means functions
normally don't have side effects like changing input data.
Try saving the result of your function calls in a new object.
--
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On June 21, 2016 3:57:54 PM PDT, Alice Domalik <
Not that I am an expert, but you should probably be using the direct approach
rather than pointing and clicking.
?postscript
?cairo_ps
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On June 23, 2016 10:15:15 AM PDT, A A via R-help wrote:
>In RGui, I'm running the following bit of code:
>win
Did you try the maintainer() function?
--
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On June 24, 2016 10:45:07 AM PDT, fgoetz wrote:
>Dear Mr. or Mrs.,
>
>Please see the previous messages for information. I had a problem with
>the heatmap.2 breaks argument and was wondering if someone could
This is like asking, "My car doesn't work. Can anyone tell me what is wrong?"
Please spend some time reading (and paying attention to) the Posting Guide
before sending any more emails here.
--
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On June 24, 2016 11:49:32 AM PDT, deva d wrote:
>hi al
Can you provide an example of what you mean? This is not a statistical theory
forum, so you should be able to describe the calculation clearly if you want
help translating it into R.
Also, read the Posting Guide, which among other things warns you that this is a
plain text mailing list so your
:
?heatmap.2
or
help.search( "heatmap.2" )
if you have installed that package but not yet loaded it using library().
--
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On June 27, 2016 7:14:01 AM PDT, fgoetz wrote:
>Hi Jeff,
>
>I just tried the maintainerfunction but it did no
"Assign ... key to a value" defies my understanding of those terms, and
includes no context (API is a very vague term). We are not (necessarily)
subject area experts in your preferred domain of jargon.
Doing things when you start up your session is typically done as described in
?Startup
--
S
Your description of the data frames as "approx" puts the solution to
considerable difficulty and speed penalty. If you want better performance you
need a better handle on the data you are working with.
For example, if you knew that every data frame had exactly three columns named
identically a
) with approx 200k data.frames
with dim(data.frame) approx 100x3.
a call
data <-do.call("rbind", data.list)
does not complete - run time is prohibitive (I killed the rsession
after 5 minutes).
I would think that merging data.frame's is a common operation. Is
Follow the listinfo link in the footer. You should be in possession of a
password with which to make changes to your subscription there.
--
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On June 28, 2016 2:46:19 AM PDT, "Monse Buenaño" wrote:
>Excuse me, I want to change my e-mail adress, where
Try another mirror?
Try the RMySQL package instead?
Ask on R-sig-db?
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On June 28, 2016 1:36:47 PM PDT, Vivek Singh wrote:
>> install.packages('RODBC')
>Installing package into ‘/home/vivek/R/x86_64-pc-linux-gnu-library/3.0’
>(as ‘lib’ is unspecifi
I can understand you not wanting to supply your actual data online, but only
you know what your data looks like so only you can create a simulated data set
that we could show you how to work with.
--
Sent from my phone. Please excuse my brevity.
On July 2, 2016 2:57:39 AM PDT, Kevin Wamae wro
. Please excuse my brevity.
On July 2, 2016 3:41:07 PM PDT, Kevin Wamae wrote:
>Hi Jeff, sorry for referring to you as Jennifer earlier, accept my
>apologies.
>
>I attached a sample dataset in the question, am afraid it must have
>failed to attach.
>
>I have attached it
Message-
>> From: kwa...@kemri-wellcome.org
>> Sent: Sun, 3 Jul 2016 09:39:59 +
>> To: jdnew...@dcn.davis.ca.us, r-help@r-project.org
>> Subject: Re: [R] R - Populate Another Variable Based on Multiple
>> Conditions | For a Large Dataset
>>
>> Hi Je
t0 %>% select( ID, admin_period1, end=start )
, by = c( ID="ID", admin_period ="admin_period1" )
)
%>% mutate( ddays = end - start )
)
--
Sent from my phone. Please excuse my brevity.
On July 3, 2016 10:24:51
%>% mutate( ddays = end - start )
)
--
Sent from my phone. Please excuse my brevity.
On July 3, 2016 11:55:14 AM PDT, Kevin Wamae wrote:
>Hi Jeff, “likes its Excel”, I don’t follow. Pardon me for any mix up.
>
>Thanks for the code. After running it, this is the e
/16, 11:28 PM, "Bert Gunter" wrote:
>
>I haven't followed this thread closely, but if it's not too late, I
>might suggest that you stop worrying about how you want your data
>frame to look and start worrying about you want to display/analyze
>your data. As Jeff su
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