Re: [R] Upper bands and lower bands

2017-06-02 Thread Jim Lemon
Hi Pedro, If I get the idea, you want a vector of length 7300 starting at 1 and ending at 0. seq(1,0,length.out=7300) Produces such a vector. It seems to me that: seq(1.1,0.05,length.out=7300) produces the upper vector and: seq(0.95,-0.05 length.out=7300) the lower. Then again, I might have t

Re: [R] subletting an array according to dimnames

2017-06-02 Thread Adams, Jean
Have you tried P2["20", "10", "0"] ? Jean On Thu, Jun 1, 2017 at 3:10 PM, li li wrote: > Hi all, > I have a three dimensional array with the corresponding dimension names. > I would like to subset the array according to the dimension names. For > example, > suppose I want to extract the value

[R] modEvA D-squared for gamma glm

2017-06-02 Thread Aanchal Sharma
Hi All, I am running a generalized linear model with gamma distribution in R (glm, family=gamma ) for my data (gene expression as response variable and few predictors). I want to calculate r-squared for this model. I have been reading online about it and found there are multiple formulas for calc

Re: [R] modEvA D-squared for gamma glm

2017-06-02 Thread Bert Gunter
... As this concerns gene expression, perhaps the Bioconductor list might be more appropriate. As it is prmarily statistics, not R programming, maybe stats.stackexchange.com might be a better venue. You might also be better off contacting the package maintainers (?maintainer) for such package-speci

[R] R 3.4.1 at end of June

2017-06-02 Thread Peter Dalgaard
Just a quick note to say that we intend to have a patch release, probably on June 30, mainly to pick up a few balls that were dropped on the 3.4.0 release. Full schedule to appear later (just need a little time to actually set it up + checking that the date doesn't collide with schedules of othe

Re: [R] Upper bands and lower bands

2017-06-02 Thread PIKAL Petr
Hi seems to me like homework, this list has no homework policy. For linear decay you can use > temp<-c(10,9,8,7,6,5,4,3,2,1) > plus <- seq(10,5, length=10)/100 > plot(1:10, temp, ylim=c(0, max(temp+plus))) > lines(1:10, temp+temp*plus) > lines(1:10, temp-temp*plus) > for exponential you should

Re: [R] Problem of a function I wrote

2017-06-02 Thread PIKAL Petr
Hi only some attachment types are alowed, see Posting Guide. Post your code with some toy data directly into body of your mail text. From your explanation I wonder why you append vaues to vector, it is rarely necessary. Cheers Petr > -Original Message- > From: R-help [mailto:r-help-bo

Re: [R] Reversing one dimension of an array, in a generalized case

2017-06-02 Thread Bert Gunter
At the very real risk of flogging a dead horse, I realized that it is slightly cleaner to use the logical index TRUE in the argument list of `[` rather than the seq_len(dim[i]) to indicate "everything" in the ith array dimension. I post on list because maybe this might be a bit informative to othe

Re: [R] subletting an array according to dimnames

2017-06-02 Thread li li
That works. Thank you! 2017-06-02 8:00 GMT-04:00 Adams, Jean : > Have you tried P2["20", "10", "0"] ? > > Jean > > On Thu, Jun 1, 2017 at 3:10 PM, li li wrote: > >> Hi all, >> I have a three dimensional array with the corresponding dimension names. >> I would like to subset the array according

[R] comparing columns and printing overlapping rows

2017-06-02 Thread Aanchal Sharma
Hi All, I have two files. 1. with only one column 2. data matrix I need to compare first columns of both files and print the rows from second file for the overlapping entries. I have solutions for awk and sed, but I need how to do it in R. Thanks Regards Anchal -- Anchal Sharma, PhD Postdoctora

Re: [R] comparing columns and printing overlapping rows

2017-06-02 Thread MacQueen, Don
There are missing details, such as: what do you mean by "overlapping"? do the "files" have the same number of rows? do you care whether the "overlapping" entries are in the same row? what kind of R data structure do you have the "files" stored in? Assuming your file 1 is stored in a vecto

[R] New var

2017-06-02 Thread Val
Hi all, I have a data set with time interval and depending on the interval I want to create 5 more variables . Sample data below obs, Start, End 1,2/1/2015, 1/1/2017 2,4/11/2010, 1/1/2011 3,1/4/2006, 5/3/2007 4,10/1/2007, 1/1/2008 5,6/1/2011, 1/1/2012 6,10/15/2004,12/1/2004 First, I want

Re: [R] New var

2017-06-02 Thread Jeff Newmiller
You do understand that this is not the "do my work for me" mailing list, don't you? You should be asking questions like "why doesn't my code do one of these if conditions?" so that you know HOW to write the rest of them yourself. In addition you have been posting here long enough to know that y

Re: [R] New var

2017-06-02 Thread Bert Gunter
Ii is difficult to provide useful help, because you have failed to read and follow the posting guide. In particular: 1. Plain text, not HTML. 2. Use dput() or provide code to create your example. Text printouts such as that which you gave require some work to wrangle into into an example that we c