At 22:11 11/02/2014, Nathan Pace wrote:
Hi,
I have a random effects meta analysis of a proportion (logit
transformation) using rma.glmm.
I have created a forest plot of the proportion (inverse logic
transformation) using forest.rma.
I have added the credibility interval.
The forest plot i
Like most plotting routines in R, forest has a ... argument that passes names
arguments through to other routines.
In forest's case, ... passes (at least) to abline, axis and segments, so all
the lines and axes in the plot are affected by any argument that is valid for
those.
In your case, speci
Hi
I do not understand what do you want? You have continuous variable, from which
you made 2 interval variables. If you want that in those variables intervals to
be named in particular way, make them factor and name them as you wish.
factor(bins_age, labels=letters[1:7])
[1] e e c f c b g a f
Good advice already from Michael and S Ellison.
I must apologize for the 'hack-job of a function' called forest() in metafor. I
realized a while ago that people would prefer more fine-grained control over
the various elements of the plot (this has come up a few times before). I think
Paul Murre
Hello, everyone, I have following csv-file(simplified) as instance:
0.29,2,50
0.32,3,10
0.28,4,71
0.27,1,62
0.53,1,33
0.83,5,100
with the first column for x-axis (proportion shared), the second for
y-axis (number of shared segments), the shades for 'number of pairs'.
I wonder how to realiz
> -Original Message-
> I must apologize for the 'hack-job of a function' called forest() in metafor.
Well, certainly no apology needed there!
> I realized a while ago that people would prefer more fine-grained control over
> the various elements of the plot (this has come up a few times
If your command looks something like this:
> forest(x,xlim=c(-6,7),cex=.8,order="prec", xlab="Effect Size",
alim=c(-.5,4),mlab="RE Average for All Studies")
In alim=c(-.5,4), increase the numbers. Make them higher than your
highest confidence interval upper bound and lower than your lowest
If you want specific values (e.g. the values of the x points),
just use those as the at= and lab= arguments to axis():
plot(x, y, pch=16, type="b", log="x", xaxt="n",
ylab=expression(bold("Y axis")), xlab=expression(bold("X
axis")))
axis(side=1, at=x, lab=x, cex.axis=.85)
David C
From: Lu
Hi All,
I've been trying to write my own code for LDA (linear discrim) so I
can modify it to be weighted LDA since some of my groups are outliers.
However, the code I write for standard LDA gives me slightly different
results to those from R (slightly different LDAs.and not just scala
Hello, everyone, I have following csv-file(simplified) as instance:
Greetings,
I have following csv-file:
0.29,2,50
0.32,3,10
0.28,4,71
0.27,1,62
0.53,1,33
0.83,5,100
with the first column for x-axis (proportion shared), the second for y-axis
(number of shared segments), the shades for 'number
>
> I think it is a problem with your directory setting & changing your
> directory.
When you make your enviro stack you set your directory to:
setwd("V:/BIOCLIM")
Then when you import your species coordinates and presence/absence status
you change your directory to:
setwd("C:/Users/Linds
I have been struggling with this same problem. I always have to re-run.
PLEASE HELP!!
I have however figured out the whole data-format issue & am now able to
save grid files for use in other GIS programs after they are re-exported.
On Thursday, August 15, 2013 1:32:31 AM UTC-7, Jenny Williams w
Hey everyone, I need help getting the mean, standard deviation, median, etc.
I'm just not sure how to write those codes in r and if someone could also
help me out with the table command that would be great too. same issue just
not really sure how to write it out. thanks for your time everyone!
okay so how do you run a simple linear regression, obtain the summary of
that, and then put it in an object?
--
View this message in context:
http://r.789695.n4.nabble.com/simple-linear-regression-tp4685213.html
Sent from the R help mailing list archive at Nabble.com.
_
On Wed, Feb 12, 2014 at 2:22 PM, frankreynolds wrote:
> okay so how do you run a simple linear regression, obtain the summary of
> that, and then put it in an object?
You start by reading the Introduction to R that came with your
installation, and then using some common sense and basic statistica
On 02/13/2014 02:49 AM, Wei Ding wrote:
Hello, everyone, I have following csv-file(simplified) as instance:
Greetings,
I have following csv-file:
0.29,2,50
0.32,3,10
0.28,4,71
0.27,1,62
0.53,1,33
0.83,5,100
with the first column for x-axis (proportion shared), the second for y-axis
(number of
Frank — you need to read the R tutorial that came with your installation. If
you don’t have the answers to your VERY BASIC questions after that, let us know.
On Feb 12, 2014, at 10:20 AM, frankreynolds wrote:
> Hey everyone, I need help getting the mean, standard deviation, median, etc.
> I'm
Hello,
At an R prompt type
?mean
?sd
?median
And read the file R-intro.pdf that comes with your installation of R.
Hope this helps,
Rui Barradas
Em 12-02-2014 18:20, frankreynolds escreveu:
Hey everyone, I need help getting the mean, standard deviation, median, etc.
I'm just not sure how to
Accessing BIOMOD2 model output is possible, but a bit convoluted.
Here's a whole chunk of code that creates a reproducible example; the
most important part is at the end.
I hope this is enough to let you get going.
Sarah
### First use a slightly modified version of the example from the help file
You might consider reading
http://cran.r-project.org/doc/contrib/Hiebeler-matlabR.pdf. I strongly
recommend reading the Introduction to R document that comes with the R software.
As to where to ask questions, this mailing list is fine as long as you follow
the Posting Guide recommendations (see
You may find http://stackoverflow.com/ to be a useful website to ask R
questions.
Kevin
On Wed, Feb 12, 2014 at 3:09 PM, Woo Young Kang wrote:
>
>
> Hi, my name is Woo Young Kang and I am a current user of R-programming.
>
> I am looking for an R-programming online questioning community and w
Dear Rolf,
Thank you for your suggestion.
Based on your remarks I solved my problem using nlm().
Actually there are two quite straightforward ways to split the complex-valued
problem into two “linked” real-valued problems.
### 1. Real part and Imaginary part
# Experimental data
E1_data <- Re(E
Hi Frede,
Thank you for your accurate answer!
If I understand well, your way to use nls() solves the problem using too many
physical parameters.
I solved the problem following the other way that you and Rolf Turner suggested
(i.e. splitting the complex-valued problem into two real-valued proble
On 13/02/14 12:03, Andrea Graziani wrote:
Using the same starting values, the two approaches bring to slightly different
solutions:
### 1. Real part and Imaginary part
fit$estimate
[1] -3.8519181 -2.7342861 -1.4823740 1.7173982 4.4529298 1.4383334
0.1564904 0.4856774 2.2789567 3.
The Statistical Computing Section of the American Statistical Association
announces the competition for the John M. Chambers Statistical Software Award.
In 1998 the Association for Computing Machinery presented its Software System
Award to John Chambers for the design and development of S. Dr. C
Hi,
after I updated Java to 7.51 on my Windows system, rJava can no longer load:
> library(rJava)
Error : .onLoad failed in loadNamespace() for 'rJava', details:
call: fun(libname, pkgname)
error: No CurrentVersion entry in Software/JavaSoft registry! Try
re-installing Java and make sure R and
I am working on a dataset which has multiple species over several plots,
categorised into two treatment groups.
For example
group_xy group_op plot species value
x o 1 A 3
x o 1 A 5
x o 1 B 4
x o 2 A 3
x o 2 A 6
x o 2 A 3
y o 1 A 3
y o 1 A 5
y o 1 B 4
y o 2 A 3
y o 2 A 6
y o 2 A 3
x p 1 A 3
x p 1
Have you investigated the suggestion in the error message yet? "Architecture"
means 32bit vs 64bit...
---
Jeff NewmillerThe . . Go Live...
DCN:Basics: ##.#. ##.#. Live
Hi,
I want to install "languageR" but is doesn't work.
I tried it by two ways:
(1) by writing the following command but there is a warning message in response:
> install.packages ("LanguageR")
Warning message:
package LanguageR is not available (for R version 2.15.2)
This problem appeared som
Dear R users,
Hello, this is Kei Takeuchi in Japan.
I have started to use R(windows, version3.0.2) and have a problem. I
think it is not difficlut but since I am beginner of R, I have no way to
solve it.
Where can I post my question?
Thank you in advance.
Kei Takeuchi
__
Dear Eve,
See http://cran.r-project.org/web/packages/languageR/index.html The name
of the package is "languageR", not "LanguageR".
Best,
Jorge.-
On Thu, Feb 13, 2014 at 3:39 PM, Eve Dupierrix wrote:
> Hi,
> I want to install "languageR" but is doesn't work.
>
> I tried it by two ways:
> (1) b
Hi Kei,
Welcome.
I think you can first read an Introduction to R
(http://cran.r-project.org/doc/manuals/R-intro.pdf)
Then read the posting guide
http://www.R-project.org/posting-guide.html and provide commented,
minimal, self-contained, reproducible code, as requested when you ask
a question to
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