Re: [R] ANOVA Permutation Test

2018-09-03 Thread Juan Telleria Ruiz de Aguirre
Thank you all for your **very good** answers: Using aovp(..., perm="Exact") seems to be the way to go for small datasets, and also I should definitely try ?kruskal.test. Juan [[alternative HTML version deleted]] __ R-help@r-project.org mailin

Re: [R] ANOVA Permutation Test

2018-09-03 Thread S Ellison
> This package uses a modified version of aov() function, which uses > Permutation Tests > > I obtain different p-values for each run! Could that be because you are defaulting to perm="Prob"? I am not familiar with the package, but the manual is informative. You may have missed something when r

Re: [R] ANOVA Permutation Test

2018-09-03 Thread Meyners, Michael
Juan, Your question might be borderline for this list, as it ultimately rather seems a stats question coming in R disguise. Anyway, the short answer is that you *expect* to get a different p value from a permutation test unless you are able to do all possible permutation and therefore use the

Re: [R] ANOVA Permutation Test

2018-09-03 Thread Michael Dewey
Dear Juan I do not use the package but if it does permutation tests it presumably uses random numbers and since you are not setting the seed you would get different values for each run. Michael On 03/09/2018 16:17, Juan Telleria Ruiz de Aguirre wrote: Dear R users, I have the following Que