Re: [R] problem with heatmap.2 in package gplots generating non-finite breaks

Never mind, the problem seems to be that I have ignored the warning "Using scale="row" or scale="column" when breaks arespecified can produce unpredictable results.Please consider using only one or the other." I just stop specifying the breaks and it works fine. Mark -

[R] problem with heatmap.2 in package gplots generating non-finite breaks

I have written a wrapper for heatmap.2 called heatmap.w.row.and.col.clust which auto-generates breaks using breaks<-round((c(seq(from=(-20 * stddev), to=(20 * stddev/20, digits = 2) #(stddev in this case = 2.5) This has always worked well in the past but now I am getting an error that non-fin

Re: [R] problem with heatmap.2

Ng Stanley wrote: > Hi, > >> temp1[1:6,] > _XXX BB_XXX C_XXX D_XXX E_XXX SkHep1_XXX > 500.75285 0.30630 0.56330 0.45755 0.496650.74685 > 630.35930-0.22725 0.04725 0.53955 0.563900.51170 > 69 -1.57515-1.67610 -1.61695 -1.11685 -0.00085

[R] problem with heatmap.2

Hi, > temp1[1:6,] _XXX BB_XXX C_XXX D_XXX E_XXX SkHep1_XXX 500.75285 0.30630 0.56330 0.45755 0.496650.74685 630.35930-0.22725 0.04725 0.53955 0.563900.51170 69 -1.57515-1.67610 -1.61695 -1.11685 -0.00085 -1.89155 910.84640 0.43