Re: [R] probit analysis

2012-06-04 Thread arun
   2.802128 I am not very confident about the results though.  A.K.   From: phale_chuong gionho To: "r-help@r-project.org" Cc: Sent: Monday, June 4, 2012 10:52 AM Subject: [R] probit analysis  Hello! > I have a very simple set of data and I would like to analyze > them with

[R] probit analysis

2012-06-04 Thread phale_chuong gionho
 Hello! > I have a very simple set of data and I would like to analyze > them with probit analysis. > The data are: X    Event    Trial > 1210  8        8 > 121  6        8 > 60.5  6        8 > I want to estimate the value of X that will give a 95% hit > rate (Event/Trial) and the corresponding 95%

[R] Probit Analysis and Interval Calculations for different LD50s

2011-03-02 Thread Colleen Kenney
I am encountering a problem with the calculation of Fieller and Delta Method confidence intervals when performing probit analysis on simulated data; my code is included below. I am testing 5 dose groups, with log doses (-0.2, -0.1, 0, 0.1, 0.2) and (1.8, 1.9, 2, 2.1, 2.2) so that the log(LD50) are

Re: [R] Probit Analysis: Confidence Interval for the LD50 using Fieller's and Heterogeneity (UNCLASSIFIED)

2010-11-22 Thread Dennis Murphy
Hi: The MASS package has a function dose.p() to produce a CI for ED50, ED90 or EDp in general (0 < p < 100). It takes a model object (presumably from a suitable logistic regression) as input. You could always take the code already available and adapt it to your situation or you could investigate

Re: [R] Probit Analysis: Confidence Interval for the LD50 using Fieller's and Heterogeneity (UNCLASSIFIED)

2010-11-22 Thread David Winsemius
On Nov 22, 2010, at 2:24 PM, Kenney, Colleen T CTR USA AMC wrote: Classification: UNCLASSIFIED Caveats: NONE A similar question has been posted in the past but never answered. My question is this: for probit analysis, how do you program a 95% confidence interval for the LD50 (or LC50, ec50,

[R] Probit Analysis: Confidence Interval for the LD50 using Fieller's and Heterogeneity (UNCLASSIFIED)

2010-11-22 Thread Kenney, Colleen T CTR USA AMC
Classification: UNCLASSIFIED Caveats: NONE A similar question has been posted in the past but never answered. My question is this: for probit analysis, how do you program a 95% confidence interval for the LD50 (or LC50, ec50, etc.), including a heterogeneity factor as written about in "Probit A

[R] probit analysis with natural response

2008-06-19 Thread Jinsong Zhao
Dear all, I have try to use mle() from package stats4 to estimate parameters of the following model: p = Pr(Y = 0) = C + (1 - C)F(x'\beta) a probit model with natural response. The log-likelihood function is: fr <- function(c, alpha, beta) { P <- c + (1-c) * pnorm(alpha + beta * x) P <- pmax