Re: [R] mhplot error with test example: "ylim not found"

2010-06-28 Thread Lotay, Vaneet
;ylim not found" Many thanks Peter. I have uploaded 1.0-23 which should have this fixed. Jing Hua -Original Message- From: Peter Ehlers [mailto:ehl...@ucalgary.ca] Sent: 28 June 2010 15:47 To: vaneet Cc: r-help@r-project.org; Jing Hua Zhao Subject: Re: [R] mhplot error with test exam

Re: [R] mhplot error with test example: "ylim not found"

2010-06-28 Thread Jing Hua Zhao
Many thanks Peter. I have uploaded 1.0-23 which should have this fixed. Jing Hua -Original Message- From: Peter Ehlers [mailto:ehl...@ucalgary.ca] Sent: 28 June 2010 15:47 To: vaneet Cc: r-help@r-project.org; Jing Hua Zhao Subject: Re: [R] mhplot error with test example: "ylim not

Re: [R] mhplot error with test example: "ylim not found"

2010-06-28 Thread Peter Ehlers
It seems to me that gap::mhtplot needs a fix. You might want to contact the maintainer (cc'd). In the meantime, you should be able to place an object ylim in your workspace before calling the function: ylim <- c(0, 10) mhtplot(test, ylim = c(0, 10)) Of course, you could also just fixt the f

[R] mhplot error with test example: "ylim not found"

2010-06-23 Thread vaneet
Hello all, I am trying to make a genome association plot for p-values related to SNPs and was fortunate to find that R contains a package that produces Manhattan plots which is what's preferred for my current project. The function mhtplot() is found in the 'gap' package which I installed in R 2.