Thank you, it seems the solution is to define the nodes in groupOTU using a
list of vectors.
On Thu, Nov 12, 2020 at 12:15 PM Rui Barradas wrote:
> Hello,
>
> You should post a reproducible example like the posting guide asks you to.
> In the mean time, are you looking for [1], section Group Cla
Hello,
You should post a reproducible example like the posting guide asks you to.
In the mean time, are you looking for [1], section Group Clades, by
package ggtree author? It even seems to be the package vignette.
[1]
https://bioconductor.riken.jp/packages/3.8/bioc/vignettes/ggtree/inst/doc/
I've been using groupOTU to color paraphyletic clades in my tree based on
lists of tips, but I have multiple clades I want to highlight. Is there
some way to use ggplot to indicate multiple paraphyletic clades?
Thank you
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