Re: [R] Savitzky-Golay Smoother

2014-09-29 Thread Erick Okuto
Dear Gabor, Paul and Ryan, Many thanks for all your guidance concerning the application of the filter/smoother. I need to temporally smooth 32 years 5 km resolution bi-monthly global NDVI dataset. On average each pixel have got up to 768 cases/images with data missing at random. I consider the dat

Re: [R] Savitzky-Golay Smoother

2014-09-26 Thread Gabor Grothendieck
On Fri, Sep 26, 2014 at 3:32 AM, Erick Okuto wrote: > Dear Paul and Henrik, > I have a time series with some missing data points that i need smoothed > using Savitzky-Golay filter. Related question was asked here > http://thr3ads.net/r-help/2012/11/2121748-Savitzky-Golay-filtering-with-missing-da

Re: [R] Savitzky-Golay Smoother

2014-09-26 Thread Paul Kienzle
You can perform the equivalent filtering by hand using something like: k = (window_length - 1) / 2 for i in k to len(x) - k xh,yh = x[points-k:points+k], y[points-k:points+k] idx = isfinite(xh) and isfinite(yh) xh,yh = xh[idx],yh[idx] p = polyfit(xh,yh, degr

[R] Savitzky-Golay Smoother

2014-09-26 Thread Erick Okuto
Dear Paul and Henrik, I have a time series with some missing data points that i need smoothed using Savitzky-Golay filter. Related question was asked here http://thr3ads.net/r-help/2012/11/2121748-Savitzky-Golay-filtering-with-missing-data but no straight forward answer was posted. However, Henrik