Collections")+theme_bw()
Thanks,
Mohan
-Original Message-
From: Dennis Murphy [mailto:djmu...@gmail.com]
Sent: Wednesday, June 17, 2015 8:42 PM
To: Radhakrishnan, Mohan (Cognizant)
Subject: Re: [R] Error bars and CI
Q: How do you expect to get error bars when you plot "group
geom="line")
p <- p + stat_summary(fun.data=mean_cl_normal,conf.int = .99, geom="errorbar",
width=0.2)
Thanks,
Mohan
-Original Message-
From: Radhakrishnan, Mohan (Cognizant)
Sent: Wednesday, June 17, 2015 12:54 PM
To: 'Dennis Murphy'
Cc: r-help@r-project.org
Sub
hakrishnan, Mohan (Cognizant)
Subject: Re: [R] Error bars and CI
Hi:
Firstly, your dplyr code to generate the summary data frame is unnecessary and
distracting, particularly since you didn't provide the input data set; you are
asked to provide a *minimal* reproducible example, which you co
Hi,
I want to plot a line graph using this data. IDX is x-axis and V1 is y-axis. I
also want standard error bars and 99% CI to be shown. My code is given below.
The section that plots the graph is the problem. I don't see all the points in
the line graph with error bars. How can I also show t
ng for; you'll have to go back to your code to see which library it
used to load.
S Ellison
> -Original Message-
> From: r-help-boun...@r-project.org
> [mailto:r-help-boun...@r-project.org] On Behalf Of Johnson,
> Franklin Theodore
> Sent: 25 October 2012 22:46
> To
rg] On Behalf Of Johnson,
> Franklin Theodore
> Sent: 25 October 2012 22:46
> To: r-help@R-project.org
> Subject: [R] error bars
>
> Hello R-help,
>
>
>
> I am using R version 2.15.1.
>
> I upgraded from R version 2.13 a few months back.
>
>
>
On Oct 25, 2012, at 2:45 PM, Johnson, Franklin Theodore wrote:
> Hello R-help,
>
>
>
> I am using R version 2.15.1.
>
> I upgraded from R version 2.13 a few months back.
>
>
>
> Previously, I was able to plot error bars on an xy scatter plot using the
> errbar function:
>
> errbar(RAEthy
Hello R-help,
I am using R version 2.15.1.
I upgraded from R version 2.13 a few months back.
Previously, I was able to plot error bars on an xy scatter plot using the
errbar function:
errbar(RAEthylene$TIME,RAEthylene$AVE,RAEthylene$AVE+RAEthylene$STD,RAEthylene$AVE-RAEthylene$STD,add
= T
> I'm new to this and struggling away with ggplot. I need to
> plot some line graphs for about 4 series. I have the values
> to plot and also the value of the standard error of the
> value. Is it possible to plot the standard error bars when
> the value are already calculated as opposed to
On Oct 3, 2012, at 6:41 AM, James Maas (MED) wrote:
> I'm new to this and struggling away with ggplot. I need to plot some line
> graphs for about 4 series. I have the values to plot and also the value of
> the standard error of the value. Is it possible to plot the standard error
> bars w
I'm new to this and struggling away with ggplot. I need to plot some line
graphs for about 4 series. I have the values to plot and also the value of the
standard error of the value. Is it possible to plot the standard error bars
when the value are already calculated as opposed to letting R d
is not data.
~ Roger Brinner
The combination of some data and an aching desire for an answer does not ensure
that a reasonable answer can be extracted from a given body of data.
~ John Tukey
-Oorspronkelijk bericht-
Van: r-help-boun...@r-project.org [mailto:r-help-boun...@r-project.org] Na
Hi Dennis,
Part of my problem could be that I'm unsure how to nest another variable
withn spd.f. Perhaps if I give a better explanation of my goal things will
make more sense.
My intent is to calculate two sets of confidence intervals to show the
benefits of a DOE approach versus a Non-DOE appro
.1,2.2,5))
myplot<-ggplot(dat1, aes(spd, r, colour = spd)) +
geom_errorbar(aes(ymin=3, ymax=5), width=.1) +
geom_point() + coord_flip()
John Kane
Kingston ON Canada
> -Original Message-
> From: adamjgabb...@gmail.com
> Sent: Thu, 26 Jul 2012 09:03:44 -0400
> To: r-help@r-project.
Hello,
I'm attempting to plot error bars side by side rather than stacked on top
of each other with ggplot2. Here is the sample code I am using:
#Code
#Data
spd<-c("s","f","f","s","f","s","s","s","f","f","s","f")
r<-c(4.9,3.2,2.1,.2,3.8,6.4,7.5,1.7,3.4,4.1,2.2,5)
#Turn spd into a factor
spd.f<
chboard)
Fax: 01631559001
E. beatriz.defranci...@sams.ac.uk
http://www.smi.ac.uk/beatriz-de-franciso
From: r-help-boun...@r-project.org [r-help-boun...@r-project.org] on behalf of
ilai [ke...@math.montana.edu]
Sent: 02 May 2012 04:14
To: Walmes Zeviani
Cc: r-help@r-
Thank you for your example. I only skimmed it, but since both
solutions use nlevels and box.ratio it is no surprise we end up at the
same place (although I do think your g-median is nicer than my 3/4).
Thing is, I wouldn't call either of these "simple"... would be nice if
one could just query the
I have a repoducibe example here
http://ridiculas.wordpress.com/2011/11/23/media-e-desvio-padrao-de-muitas-variaveis-separado-por-grupos/
Sorry for it be in Portuguese.
Walmes.
==
Walmes Marques Zeviani
LEG (Laboratório de
Hi,
I think the issue is not "respecting the groups" but finding the
x-location of the center of bars in panel.barchart(groups,...). Don't
know about the memisc package, but doesn't look like it provides an
easy solution. This is how I do it:
http://www.mail-archive.com/r-help@r-project.org/msg1622
Hi
I have the following barchart to which I want to add error bars.
library(lattice)
barchart(Change~fTreat,groups=Process,change,
auto.key=list(points=FALSE,rectangles=TRUE),
panel=function(x, y,...){
panel.barchart(x,y,origin = 0,...);
Hi
I have the following barchart to which I want to add error bars.
library(lattice)
barchart(Change~fTreat,groups=Process,change,
auto.key=list(points=FALSE,rectangles=TRUE),
panel=function(x, y,...){
panel.barchart(x,y,origin = 0,...);
You might try 'bargraph.CI' in R pkg 'sciplot'.
?bargraph.CI
HTH,
Savi
>>> Anna Harris 6/15/2011 1:00 PM >>>
Hi,
Can anyone help with plotting vertical error bars on a bar graph.
I have tried following examples online and in the big R book and writing my own
function but I have been unsucc
Hi,
Can anyone help with plotting vertical error bars on a bar graph.
I have tried following examples online and in the big R book and writing my own
function but I have been unsuccessful and donât really have an understanding
of what it is I am doing. I have calculated my standard errors s
This is an interesting discussion on barchart (without error bars)
http://www.decisionsciencenews.com/2010/08/11/which-chart-is-better/
Dieter
--
View this message in context:
http://r.789695.n4.nabble.com/Error-bars-in-lattice-barchart-with-groups-tp3065864p3066860.html
Sent from the R help
Henning Wildhagen wrote:
>
>
> i want to plot gene regulation data in a lattice barchart. To illustrate
> the problem i encounter, the following code uses the "barley"dataset:
>
>
> #No, i tried to add error bars using the following code:
> ..
>
As Deepayan noted in
# http://markmail.
Dear R-users,
i want to plot gene regulation data in a lattice barchart. To illustrate
the problem i encounter, the following code uses the "barley"dataset:
library(lattice)
barley[["SD"]] <- 5
PLOT <- barchart(data=barley, yield~variety|site, groups=year,origin=0,
as.table=TRUE,
scales=list(
Hi all,
I've read the emails of Dan, Deepayan and Sundar about adding error bars to
the lattice plots (
https://stat.ethz.ch/pipermail/r-help/2006-October/114883.html), but I still
have the problem when I want to adding error bars to barchart. I tried both
the solution of Deepayan and Sundar but w
>
> Well, when the error message says "argument 'lx' is missing, with no
> default", it really means that argument 'lx' is missing, with no
> default. Your panel function has an argument 'lx', which you forgot to
> change to 'ly' as you did with the prepanel function.
>
> Hope that helps...
>
> Tha
> bar.err (agricolae)
> plotCI (gplots)
> xYplot (Hmisc)
> error.bars (psych)
> dispersion (plotrix)
> plotCI (plotrix)
>
Not to mention: http://biostat.mc.vanderbilt.edu/wiki/Main/DynamitePlots
Hadley
--
Assistant Professor / Dobelman Family Junior Chair
Department of Statistics / Rice Univers
Jim Lemon wrote:
> On 04/09/2010 08:55 PM, Samantha Reynolds wrote:
>> Hi
>>
>> I was hoping someone might be able to help me I have this data:
>>
>> birdid timetaken numvisits ptachchoice time bold
>> 1087 810 1 AM0
>> 108728 6 1
On 04/09/2010 08:55 PM, Samantha Reynolds wrote:
Hi
I was hoping someone might be able to help me I have this data:
birdid timetaken numvisits ptachchoice time bold
1087 810 1 AM0
108728 6 1 PM0
108713 3
Hi
I was hoping someone might be able to help me I have this data:
birdid timetaken numvisits ptachchoice time bold
1087 810 1 AM0
108728 6 1 PM0
108713 3 2 AM0
1087 121 0
On 20 February 2010 11:22, Sam Albers wrote:
> #I've tried to alter the panel function according to the thread to produce
> vertical error bars in my barcharts
>
> prepanel.ci <- function(x, y, ly, uy, subscripts, ...) {
>
> y <- as.numeric(y)
> ly <- as.numeric(ly[subscripts])
>
On 8 April 2010 06:03, Ivan Gregoretti wrote:
> Hi Sam and everybody,
>
> Can you educate me a little bit on the use of barchart?
>
> A command like this
>
> barchart(~table(someProperty), data=A)
>
> produces a barchart with horizontal bars.
That should be
barchart(table(someProperty), data=A)
Hi Ivan,
Can you educate me a little bit on the use of barchart?
>
Unfortunately no... For this post I eventually used the barplot2() in the
gplots packages. I got bogged down trying to do it in lattice so I looked
for an alternative. It was quite straight forward which was nice and I was
able to
Hi Sam and everybody,
Can you educate me a little bit on the use of barchart?
A command like this
barchart(~table(someProperty), data=A)
produces a barchart with horizontal bars.
I want to produce that graph but with VERTICAL bars.
clearly, horizontal=FALSE does not work.
Thank you,
Ivan
of Manchester
Oxford Road, Manchester M13 9PL, UK
Tel. 0044 161 275 3485
iasonas.lampria...@manchester.ac.uk
--- On Tue, 30/3/10, William Revelle wrote:
> From: William Revelle
> Subject: Re: [R] error bars
> To: "Iasonas Lamprianou" , r-help@r-project.org
> Date: Tuesday,
Iasonas,
In response to PS.1
try error.bars in the psych package.
Bill
At 1:04 AM -0700 3/30/10, Iasonas Lamprianou wrote:
Dear friends,
I have a statistical question. Sometimes, if I compare boys to girls
on a specific variable, the error bars (confidence interval of
means) seem to overla
you can write a function for yourself using arrows:
#x,y: dataset as vectors
#xe,ye: errors per entry as vectors, if the errors are symmetric
arrbar<-function(x,y,xe,ye){
l<-length(x)
for (i in 1:l) {
arrows(x[i],y[i],x[i]-xe[i]/2,y[i],angle=90,length=0.05)
Dear friends,
I have a statistical question. Sometimes, if I compare boys to girls on a
specific variable, the error bars (confidence interval of means) seem to
overlap slightly. Still, when I run a t-test, I find statistically significant
differences. The rule is clear: if the confidence interv
Hello,
I am attempting to write a script that adds error bars to a barchart. I
basing my attempt heavily on the following thread:
http://tolstoy.newcastle.edu.au/R/e2/help/06/10/2791.html
I can't seem to get around the problem that was discussed in the thread. The
following example should illust
On 01/15/2010 08:43 AM, kellys17 wrote:
Hi,
I have a data set that has columns "bird.species", "tree.species"and
"count". I am investigating differences in tree species usge by two species
of birds. "Count" is numerical and is a count of observations of bird
species x using tree species x. F
Hi,
I have a data set that has columns "bird.species", "tree.species"and
"count". I am investigating differences in tree species usge by two species
of birds. "Count" is numerical and is a count of observations of bird
species x using tree species x. For bird species A I have 3 different counts
Thanks Mathieu and Jim,
That worked!
From: Jim Lemon
Cc: r
Sent: Friday, April 17, 2009 7:45:39 AM
Subject: Re: [R] error bars in matplot
Tim Smith wrote:
> Hi,
>
> I was trying to get error bars in my matplot. I looked at an earlier thread,
Tim Smith wrote:
Hi,
I was trying to get error bars in my matplot. I looked at an earlier thread,
and the sample code that I made is:
#--
library(plotrix)
mat1 <- matrix(sample(1:30,10),nrow=5,ncol=2)
ses <- matrix(sample(1:3,10,replace=T),nrow=5,ncol=2)
vect <- seq(20,100,20)
Hi Tim,
there are a couple of problems in your example.
(1) The most important is that your 'x' values for the matplot
are 1:5 (that is row numbers of your mat1 matrix)
and are seq(20,100,20) (that is, your vect vector) for your error bars.
Error bars are thus plotted outside the plotting are
Hi,
I was trying to get error bars in my matplot. I looked at an earlier thread,
and the sample code that I made is:
#--
library(plotrix)
mat1 <- matrix(sample(1:30,10),nrow=5,ncol=2)
ses <- matrix(sample(1:3,10,replace=T),nrow=5,ncol=2)
vect <- seq(20,100,20)
rownames(mat1) <-
On Thu, Feb 19, 2009 at 1:19 AM, jdeisenberg wrote:
>
>
> Nicole Hackman wrote:
>>
>> Hello, I have a very simple data set i imported from excel including 96
>> averages in a column along with 96 standard errors associated with those
>> averages (calculated in excel). I plotted the 95 averages us
Nicole Hackman wrote:
>
> Hello, I have a very simple data set i imported from excel including 96
> averages in a column along with 96 standard errors associated with those
> averages (calculated in excel). I plotted the 95 averages using r and I
> am
> wondering if it is possible to plot the s
Check out ggplot2:
http://had.co.nz/ggplot2/
Particularly:
http://had.co.nz/ggplot2/geom_errorbar.html
If you need more help you'll have to provide a self-contained set of data/code.
Hopefully you'll soon be completely rid of this strange "excel" of
which you speak :Op
On Wed, Feb 18, 2009 at 9
Hello, I have a very simple data set i imported from excel including 96
averages in a column along with 96 standard errors associated with those
averages (calculated in excel). I plotted the 95 averages using r and I am
wondering if it is possible to plot the second column of standard errors
while
On Fri, 2008-12-19 at 13:06 +, Kelly-Gerreyn B.A. wrote:
> Dear Help
>
> I'm new to R (from matlab)...using windows XP.
>
> I've tried to work out, to no avail, 4 things:
>
> 1) rotating the numbers on axes...something to do with par(str) ??
?par and argument 'las' for basic control. There
Hi,
These are rather basic; I'd strongly suggest that you at least
read An Intro to R, and maybe some of the other excellent
beginner materials available. The answers are also
easily available through Google, or RSiteSearch.
> 1) rotating the numbers on axes...something to do with par(str) ??
Th
Dear Help
I'm new to R (from matlab)...using windows XP.
I've tried to work out, to no avail, 4 things:
1) rotating the numbers on axes...something to do with par(str) ??
2) how to close a window having opened one e.g. windows(7,7)
3) how to manipulate the key (e.g. dots, lines etc) on the leg
All,
I'm trying to adapt some code provided by Deepayan Sarkar from a previous
thread (https://stat.ethz.ch/pipermail/r-help/2005-October/081571.html) on
this topic.
## This code produces a graph w/o error bars:
xyplot(Y ~ Hr, data, groups=DRUG,
panel=function(x,y,...){
panel.x
only one out of many many
dt = cbind(sim$mean$u2+sim$mean$beta1,sim$sd$u2)
dt = dt[order(dt[,1]),]
bounds =
cbind(c(dt[,1]-1.96*dt[,2],dt[,1]+1.96*dt[,2],dt[,1]),rep(1:length(sim$mean$u2),3))
bounds = bounds[order(bounds[,2]),]
plot(bounds)
T
Matthew Krachey wrote:
> I'm trying to compare the
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