Re: [R] Package(s) for making waffle plot-like figures?

2013-11-03 Thread Zhao Jin
, too. Best regards, Zhao 2013/11/2 Jim Lemon > On 11/02/2013 10:35 AM, Zhao Jin wrote: > >> Dear all, >> >> I am trying to make a series of waffle plot-like figures for my data to >> visualize the ratios of amino acid residues at each position. For each one >>

[R] Package(s) for making waffle plot-like figures?

2013-11-01 Thread Zhao Jin
Dear all, I am trying to make a series of waffle plot-like figures for my data to visualize the ratios of amino acid residues at each position. For each one of 37 positions, there may be one to four different amino acid residues. So the data consist of the positions, what residues are there, and t

Re: [R] vegan capscale 'subscript out of bounds' error

2013-07-15 Thread Zhao Jin
Dear Jari, Thanks a lot for your reply. Let me describe more about my dataset: it consists of count data for samples, and shows how many copies of a certain bacteria are in a sample. There are 92 samples (rows), and about 3500 kinds of bacteria (columns). Variable 1 (Var1) is a factor indicati

[R] vegan capscale 'subscript out of bounds' error

2013-07-12 Thread Zhao Jin
similarity matrix in the formula. Here is more info on the R version and the OS: R version 3.0.1 (2013-05-16) Platform: x86_64-w64-mingw32/x64 (64-bit) Thanks a lot for any help or comment, Zhao -- Zhao JIN Ph.D. Candidate Ruth Ley Lab 467 Biotech Field of Microbiology, Cornell University Lab: 607.25

Re: [R] How to do the same thing for all levels of a column?

2012-07-24 Thread Zhao Jin
hn Kane > >>>> Kingston ON Canada > >>>> > >>>>> -Original Message- > >>>>> From: [2]z...@cornell.edu > >>>>> Sent: Mon, 23 Jul 2012 18:01:11 -0400 > >>>>> To: [3

Re: [R] How to do the same thing for all levels of a column?

2012-07-24 Thread Zhao Jin
; D > > > > A > > > > p2 > > > > 0.0002731 > > > > T > > > > E > > > > N > > > > L > > > > V > > > > P > > > > G > > > > A > > > > p3 > > > >

[R] How to do the same thing for all levels of a column?

2012-07-23 Thread Zhao Jin
Many thanks for any help you could give me on this topic! :) Regards, Zhao -- Zhao JIN Ph.D. Candidate Ruth Ley Lab 467 Biotech Field of Microbiology, Cornell University Lab: 607.255.4954 Cell: 412.889.3675 [[alternative HTML version deleted]] ___

[R] about prediction with a factor

2011-02-10 Thread Zhao Jin
a prediction with new data like yd=c(4,5,6,7,8) for male and female separately ? Thank you very much. Zhao Jin [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-hel