Re: [R] Selecting elements

2021-08-25 Thread Silvano Cesar da Costa
Wow, That's exactly what I want. But, if possible, that a list was created with the selected elements (variable and value). Is it possible to add in the output file? Thank you very much. Prof. Dr. Silvano Cesar da Costa Universidade Estadual de Londrina Centro de Ciências Exatas Departamen

Re: [R] Selecting elements

2021-08-23 Thread Silvano Cesar da Costa
, decreasing=TRUE), ]) # The end result is: (Selected.data.2 = Order[c(1,2,3,4,5,6,7,8,9,11), ]) # Scheme: 3A - 4B - 2C - 1D sort(Selected.data.2$Var.1) How to make the selection of the 10 elements automatically? Thank you very much. Prof. Dr. Silvano Cesar da Costa Universidade Estadual de

Re: [R] Selecting elements

2021-08-20 Thread Silvano Cesar da Costa
options using R? Thanks, Prof. Dr. Silvano Cesar da Costa Universidade Estadual de Londrina Centro de Ciências Exatas Departamento de Estatística Fone: (43) 3371-4346 Em sex., 20 de ago. de 2021 às 03:28, PIKAL Petr escreveu: > Hallo > > I am confused, maybe others know what do y

[R] Selecting elements

2021-08-19 Thread Silvano Cesar da Costa
Dr. Silvano Cesar da Costa Universidade Estadual de Londrina Centro de Ciências Exatas Departamento de Estatística Fone: (43) 3371-4346 [[alternative HTML version deleted]] __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see ht

[R] Common elements

2019-03-08 Thread Silvano Cesar da Costa
,] 1186389 [25,] 1190425 [26,] 1192235 How can I do this? Thanks. Prof. Dr. Silvano Cesar da Costa Universidade Estadual de Londrina Centro de Ciências Exatas Departamento de Estatística Fone: (43) 3371-4346 [[alternative HTML version deleted

[R] Function inside Sweave

2014-01-08 Thread Silvano Cesar da Costa
p="") cria.tabela(x) } } geral() I need to change the variable DISCIPLINA created in the function by the variable DISCIPLINA in my dataset, but not working. Reading data was taken with: require(foreign) require(xtable) dados = read.epiinfo('C:/Colegiado de Veterinária/Dados

[R] Problems with xtable?

2013-12-13 Thread Silvano Cesar da Costa
& 24,07 & 100,00 \\ 6HIT011 & 0,00 & 0,00 & 3,70 & 27,78 & 68,52 & 100,00 \\ 6MOR012 & 0,00 & 0,00 & 41,82 & 47,27 & 10,91 & 100,00 \\ 6PAT013 & 0,00 & 5,56 & 29,63 & 44,44 & 20,37 & 100,00 \\ 6SOC016 & 3,6

[R] means in tables

2013-04-10 Thread Silvano Cesar da Costa
(tab1)){ for(j in 1:ncol(tab1)){ for(k in 1:nrow(tab2)){ for(l in 1:ncol(tab2)){ Médias = tab1$i[j] Médias but it does't work. I don't know programming. How can I do this? Thanks, ----- Silvano Cesar da Costa Un

[R] SNPRelate problems

2012-12-18 Thread Silvano Cesar da Costa
rt snpgdsBED2GDS ... Erro em snpgdsBED2GDS(bed.fn, fam.fn, bim.fn, out.gdsfn = "C:/Silvano/Incor/Baependi/Dados Baependi/baep.gds", : Cannot open the file . What can I do? What is wrong? Thanks, - Silvano Cesar da Costa Universidade Estadua

[R] Kinship2 and GenABEL

2012-11-09 Thread Silvano Cesar da Costa
p(pedig) > (mod1 = polygenic(altura ~ SEX + idade, data=Dados, kin=kmat)) Erro em intI(i, n = d[1], dn[[1]], give.dn = FALSE) : invalid character indexing > How can I calculate heritabilty using GenABEL with kinship matrix of kinship2 package? Thanks, --------

[R] Extracting columns

2012-11-08 Thread Silvano Cesar da Costa
who need to apply the commands above 22 times. Is there a way to schedule these operations? ------------- Silvano Cesar da Costa Universidade Estadual de Londrina Centro de Ciências Exatas Departamento de Estatística Fone: (43) 3371-4346 _

[R] Interaction

2012-10-29 Thread Silvano Cesar da Costa
Hi, I'm fitting a model with 3 variables: A, B and SNP. The response variable is Y. I would like fit the following model, in this order: Y ~ A + B + A*B + SNP In general, the R sets of the form: Y ~ A + B + SNP + A*B How do this? - Silvano

Re: [R] factor or character

2012-10-24 Thread Silvano Cesar da Costa
Hi, still doesn't work. > Hello, > > I've just seen the error, you are _not_ searching for colnames in > mod5.sig$snps. Corrected: > > Selec = todos[ , colnames(todos) %in% mod5.sig$snps] > > Hope this helps, > > Rui Barradas > Em 23-10-2012 21:17,

Re: [R] factor or character

2012-10-23 Thread Silvano Cesar da Costa
ou are trying to find > colnames in a variable coded as integers (a factor, like str shows). > > Hope this helps, > > Rui Barradas > Em 23-10-2012 19:02, Silvano Cesar da Costa escreveu: >> Hi, >> >> The program below work very well. >> >> (snps = c('rs

[R] factor or character

2012-10-23 Thread Silvano Cesar da Costa
vels "rs10058955_A",..: 89 59 88 73 40 35 97 55 87 204 ... But it doesn't work. The output is: > Selec = todos[ , colnames(todos) %in% snps] > head(Selec) data frame with 0 columns and 6 rows What's is wrong? Thanks a lot,

Re: [R] Reading multiple files

2012-09-26 Thread Silvano Cesar da Costa
r message???) is due > to the file referencing or naming. For example, it's not clear to me why > you take the substring of the file name, only to paste on the file type > suffix later. > > Jean > > > > "Silvano Cesar da Costa" wrote on 09/26/2012 04:31:

Re: [R] Reading multiple files

2012-09-26 Thread Silvano Cesar da Costa
Hi, I didn't notice problems with this. > Will your data be read in correctly if you do away with the colClasses > argument to read.delim (or read.table)? > > Jean > > > > "Silvano Cesar da Costa" wrote on 09/26/2012 09:11:33 AM: >> >> Hi, &

[R] Reading multiple files

2012-09-26 Thread Silvano Cesar da Costa
er", 5), rep("numeric", 5)), sep = "")) } It happens that the files have different number of columns. And I can't solve the problem. Any suggestions? - Silvano Cesar da Costa Universidade Estadual de

Re: [R] Common elements in columns

2012-09-03 Thread Silvano Cesar da Costa
list(df1$C1, df2$C1, df3$C1, df4$C1) >> Reduce(intersect, x) > [1] "G" "E" "H" "J" >> > > > On Mon, Sep 3, 2012 at 7:01 AM, Silvano Cesar da Costa > wrote: >> Hi Arun, >> >> it's exactly what I wanted. >>

Re: [R] Common elements in columns

2012-09-03 Thread Silvano Cesar da Costa
E H J > A.K. > > > > - Original Message - > From: Silvano Cesar da Costa > To: r-help@r-project.org > Cc: > Sent: Sunday, September 2, 2012 7:05 PM > Subject: [R] Common elements in columns > > Hi, > > I have 4 files with 1 individuals in each

[R] Common elements in columns

2012-09-02 Thread Silvano Cesar da Costa
check which common elements in the columns of C1 4 files? Thanks, - Silvano Cesar da Costa Universidade Estadual de Londrina Centro de Ciências Exatas Departamento de Estatística Fone: (43) 3371-4346 __ R

[R] Pedigrees

2012-08-16 Thread Silvano Cesar da Costa
] pdf(paste("plot", famid, ".pdf")) plot(pedig[famid]) dev.off() } Error em `[.pedigreeList`(pedig, "famid") : Familiy famid not found but is not working. How to solve the problem? Thanks, ------------- Silvano Cesar da Costa

Re: [R] NULL column

2012-08-08 Thread Silvano Cesar da Costa
2.4252 1.837208 5.509042e-061 > > Bill Dunlap > Spotfire, TIBCO Software > wdunlap tibco.com > > >> -Original Message- >> From: r-help-boun...@r-project.org [mailto:r-help-boun...@r-project.org] >> On Behalf >> Of arun >> Sent: Wednesday,

[R] NULL column

2012-08-08 Thread Silvano Cesar da Costa
1351 rs46 163.3730 3.304276 3.279925e-06 1 rs63 162.7924 2.084678 5.023893e-06 1 rs24 162.4252 1.837208 5.509042e-06 1 How can I do this? Thanks, ----- Silvano Cesar da Costa Universidade Estadual

[R] regression analysis

2012-07-25 Thread Silvano Cesar da Costa
= numeric(1) for(i in 1:1){ mod = lm(RESP~x[i] p-value[i] = summary(mod)$coe[2,4] } Could someone suggest a reading material or any suggestions, I thank you. - Silvano Cesar da Costa Universidade Estadual de Londrina Centro de Ciências Exatas