Re: [R] Differential Gene Expression in R

  You can look into the edgeR vignette. To get the vignette type 'vignette("edgeR")' in the R command line. Also, just type 'vignette()' and R will list all the vignette's for your loaded packages.  Vignettes often have a model analysis that you can follow along and try to adjust to your specif

Re: [R] Joining data frames

    I think, but I'm not sure, that when you use merge it basically attaches one data frame to the other. I do not think it matches up entries from a particular column in each data frame (and I know biologists frequently want to match entries from a particular column in each data frame). For th

Re: [R] analyzing results from Tuesday's US elections

Bye the way, I thought I had checked my e-mail before sending it, but my last e-mail had an unfortunate typo with an 'I' that originally belonged to the beginning of a deleted sentence. Matthew On 11/17/20 1:54 AM, Matthew McCormack wrote: External Email - Use Caution No

Re: [R] analyzing results from Tuesday's US elections

No reason to apologize. It's a timely and very interesting topic that provides a glimpse into the application of statistics in forensics. I had never heard of Benford's Law before and I think it is really fascinating. One of those very counter intuitive rules that show up in statistics and

Re: [R] analyzing results from Tuesday's US elections

  I really like this guy's video as well. (He also has another nice video critiquing a statistical analysis of vote results from Kent county, Michigan that was presented by a Massachusetts Senate candidate, who has some impressive academic credentials. )   And continuing in this same vein of t

Re: [R] analyzing results from Tuesday's US elections

oups sci.stat.consult (applied > statistics and consulting) and sci.stat.math (mathematical stat and > probability)." > > On Mon, 9 Nov 2020 00:53:46 -0500 > Matthew McCormack wrote: > >> You can try here: >> https://secure-web

Re: [R] analyzing results from Tuesday's US elections

You can try here: https://decisiondeskhq.com/ I think they have what you are looking for. From their website: "Create a FREE account to access up to the minute election results and insights on all U.S. Federal elections. Decision Desk HQ & Øptimus provide live election night coverage, race-spec

Re: [R] RNA Seq Analysis in R

As with the previous post, I agree that Bioconductor will be a better place to ask this question. As a quick thought you also might try to adjust the p-value in the last line: DEGs = subset(tT, P.Value < 0.01 & abs(logFC) > 2). You could play around with the P.Value, 0.01 is pretty low, you co

Re: [R] tcltk2 entry box

so all they have to do is get the script started. However, there is always a couple of pieces of information that will change each time the script is used (for example, a different file will be processed by the script). So, I would like a way for the user to input that information as the script ra

Re: [R] working on a data frame

On 7/24/2014 8:52 PM, Sarah Goslee wrote: > Hi, > > Your description isn't clear: > > On Thursday, July 24, 2014, Matthew > wrote: > > I am coming from the perspective of Excel and VBA scripts, but I > would like to do the following in R. > >