[R] How fast is the JSS reviewing process?

Hi all, I thought I read somewhere that the reviewing process of the Journal of Statistical Software was quite fast (arround 3 month). Is that correct? -- Christophe Genolini Maître de conférences en bio-statistique Vice président Communication interne et animation du campus Université Paris

[R] microbenchmark

imes=1000) - In blue temps[,2], that is for(i in 1:1000)microbenchmark(...times=1) So why is there such a bid difference? What is the correct execution time for my instruction? Christophe -- Christophe Genolini Maître de conférences en bio-statistique Vice président Communication interne e

Re: [R] Add axes to a 3D scene (afer makeTriangles)

at Ben Bolker and I put into a question requesting labels on the scatter3d function in package "car"; http://stackoverflow.com/questions/8204972/carscatter3d-in-r-labeling-axis-better/8206320#8206320 -- Christophe Genolini Maître de conférences en bio-stat

[R] Is it possible to be sponsored by R?

o you think I can ask to the R fondation? Sincerely Christophe -- Christophe Genolini Maître de conférences en bio-statistique Vice président Communication interne et animation du campus Université Paris Ouest Nanterre La Défense [[alternative HTML version de

[R] r-help or r-devel ?

Hi the list, I have some basic questions about "writing a package". On which list shall I post them? Theoretically, I am supposed to post them on r-devel, but all the questions on this list are very advance questions, not basic ones... So I don't know what to do. Christophe

Re: [R] exporting 3D dynamic graph

Perfect, thanks a lot ! > On 11/5/2012 8:23 AM, Christophe Genolini wrote: >> Hi the list, >> >> Using misc3d, we can export 3d dynamic graph in pdf format. >> >> Is it also possible to export these graph into a format that we can publish >> on the web? >

[R] exporting 3D dynamic graph

Hi the list, Using misc3d, we can export 3d dynamic graph in pdf format. Is it also possible to export these graph into a format that we can publish on the web? Christophe -- Christophe Genolini Maître de conférences en bio-statistique Vice président Communication interne et animation du

Re: [R] Problem with a submission to jss

Le 14/10/2012 00:00, Duncan Murdoch a écrit : On 12-10-13 3:20 PM, Christophe Genolini wrote: Hi the list, I am about to submit an article describing an R package to the Journal of Statistical Software but I encounter a strange behavior of LaTeX: the numbering of the figure is correct (1. 2

[R] Petit traité de programmation orienté obje t sous R

... You were looking for a good resolution for the 2010 academic year? Try S4 ! Christophe -- - Christophe Genolini Maitre de conférences INSERM U669, Equipe Biostatistiques UFR STAPS, Université de Paris Ouest-Nanterre-La

Re: [R] Exporting an rgl graph

Thanks a lot Both Asymptote and MeshLab work fine. Thanks for this article, Luke. On my particular case, I need to export lines (1D object in a 3D space) and not surfaces (2D objects). Is it possible to draw lines with misc3d ? Christophe Genolini Luke Tierney a écrit : The current issue

[R] Drawing a line with misc3d

Hi the list, I would like to draw some lines with misc3d. I find a lot of tools to draw surfaces, but nothing for simple line... Is it possible? Note that I know that it is possible to draw lines with rgl (using lines3d), but I need to do it with misc3d to export the drawing in .asy format. A

[R] S4: Multiple inheritance

Hi all, Working with S4 object, I definine two class foo1 and foo2. I define '[' (resp. '[<-') for the two classes. Then I define a third class foo3 that inherit from both foo1 and foo2. Is there a way to make '[' (resp. '[<-') for foo3 inherit from '[' (resp. '[<-') for foo1 and foo2? Than

Re: [R] aggregate without removing empty subset

t;A")) apply(m1, 2, tapply, part1, mean) ##Perfect (dim=c(3,3)) apply(m1, 2, tapply, part2, mean) ## dim=NULL... apply(m2, c(2,3), tapply, part1, mean) ## Perfect (dim=c(3,3,2)) apply(m2, c(2,3), tapply, part2, mean) ## dim=c(3,2) Christophe > Try this: > > apply(m, 2, tapply, par

[R] aggregate without removing empty subset

Hi the list, As it is say in its doc, the aggregate function remove empty subsets. Is it possible to NOT remove empty subset ? --- 8< --- m <- matrix(1:12,4) part <- factor(c("A","B","A","B"),levels=c("A","B","C")) aggregate(m,list(part),mean) ### I get: # Group.1 V1 V2 V3 # 1 A 2

[R] Dealing with an argument missing in ...

Hi the list I define a S3 function that can have a various number of argument using '...' When some arguments are missing, I would like to give them some default value: func.numeric <- function(x,...){ if(missing(y)){y<-3} } But it does not works... I precise that I can not put 'y' explic

[R] [R-pkgs] KmL 1.1.1

s - Possibility to use three different ways to define the starting conditions - Correction of minor bugs Christophe Genolini ___ R-packages mailing list r-packa...@r-project.org https://stat.ethz.ch/mailm

[R] matrix to a C function

Hi the list, Is there a way to give a matrix to a C function, and then to use it as a matrix ? I write a function to print a matrix, but I use it as a vector : 1. void printMatrix(double *mTraj,int *nbCol, int *nbLigne){ 2. int i=0,j=0; 3. for(i=0 ; i < *nbLigne ; i++){ 4. for(j=0

Re: [R] Optimizing C code

Duncan Murdoch a écrit : On 22/01/2010 12:52 PM, Christophe Genolini wrote: Thanks both of you. > > > Inf - Inf > [1] NaN So isn't the line 9 useless ? If either x[i] or y[i] are NA, then dev will be NA and !ISNAN(dev) will detect it... Sothe loop cool be 8.for(i = 0

Re: [R] Optimizing C code

Thanks both of you. > Inf - Inf [1] NaN So isn't the line 9 useless ? If either x[i] or y[i] are NA, then dev will be NA and !ISNAN(dev) will detect it... Sothe loop cool be 8.for(i = 0 ; i < taille ; i++) { 10.dev = (x[i] - y[i]); 11.if(!ISNAN(dev)) { 12. dist +

[R] Optimizing C code

Hi the list, I need to write some efficient distances function, so I read the code for the Euclidean distance. I do not understand the purpose of the line 11 : if x[i] and y[i] are not NA (line 9), can dev be NA ? Christophe #define both_FINITE(a,b) (R_FINITE(a) && R_FINITE(b)) #define both

[R] Number of download.

Hi the list Is there a way to know how many times an R package (on CRAN) has been download ? Christophe __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posti

[R] Bug: more information on a crash

Hi the list, In the package KmL (new version, not release yet), the main function seems to work correctly but once in a while, R crash (full crash, anything link with R is closed and windows ask if it can send a crash report). More precisely, when I run it in a loop on 1000 data sets, the cra

[R] savePlot for Mac and / or Linux?

Hi all, In the package rtlu, I use the function savePlot. It is convenient since it let the user decide in which graphic format he wants his graph to be export. But when I run R CMD check, I get the following message : rtlu(V1,fileOutput="First.tex",textBefore="\\section{Variable 1 to 3}",

[R] Crash caused by a call to a C function

Hi the list I write a function MyFunc. To optimize it, I write a C function MyFuncC then a function MyFunc2 that call .C(“MyFuncC”,….) The two functions MyFunc and MyFunc2 seem to behave exactly the same way (they give the same results). But when I test MyFunc2 several times (around 20), R cra

[R] Sending a function as an argument to C code.

Hi the list, I am writing a function (myFunc) that is using an other function (let say distance). +++ dist1 <- function(x,y)dist(rbind(x,y)) dist2 <- function(x,y)y2 myFunc <- function(x,distance){ cat("...\n") cat(distance(1,x)) } myFunc(x=3,distance=dist1) myFunc(x=3,distance=

[R] "R CMD check" does not find a mistake

Hi the list, I build a package. They was a mistake in it, but R CMD check did not find it. Is that normal ? Here is what Kurt gets (which is right, I did this mistake): --- 8< * checking for code/documentation mismatches ... WARNING S4 class codoc mismatches from documentatio

Re: [R] "time series", "longitudinal data" or "trajectories"

le at that, but is it the idea ? Christophe At 04:02 PM 6/5/2009, Christophe Genolini wrote: Hi the list Strictly speaking, this is not a "R" question, but I need the information for the creation of a package. My question is about vocabulary: What is the difference b

[R] "time series", "longitudinal data" or "trajectories"

Hi the list Strictly speaking, this is not a "R" question, but I need the information for the creation of a package. My question is about vocabulary: What is the difference between "time series", "longitudinal data" and "trajectories"? Sincerely Christophe __

Re: [R] Sweave: Changing the background color, adding a border

Duncan Murdoch a écrit : On 19/04/2009 6:03 AM, Christophe Genolini wrote: Hi all, I am using Sweave to produce a document. Unfortunately, I have to print several copies and I can't print them in color. So I would like to change the way of printing the code. I would like to print the

[R] Sweave: Changing the background color, adding a border

Hi all, I am using Sweave to produce a document. Unfortunately, I have to print several copies and I can't print them in color. So I would like to change the way of printing the code. I would like to print the code in a box with a black borderline and a grey background (quite classic). Is it

[R] Redefining [ using next method

Hi all, I would like to use an object and to add some definition to the [ function, but I do not manage... My objet is a "trajectories", a matrix whose columne name does contain information : - trajectories <- function(traj,varName,time){ colnames(traj) <- paste(varName,time,sep="")

Re: [R] probleme with savePlot (to eps)

device that was not documented as possible. Have you looked at dev.copy or dev.print as a method of getting the user choice of screen displayed graphics to an output file? -- David Winsemius On Mar 1, 2009, at 6:02 PM, Christophe Genolini wrote: Thanks for your answer. Use the postscript devi

Re: [R] probleme with savePlot (to eps)

Thanks for your answer. Use the postscript device to save .ps or .eps files. Unfortunatly, I can't. I am using savePlot in a package. Several graphs (up to 100) are exported at the same time and I would like the user to chose the extension. It is why I need savePlot. Beside, I did not find an

[R] probleme with savePlot (to eps)

Hi the list, I used savePlot to export some eps graph but it seems that the graph file hold a bug. I include the graph.eps in a LaTeX file. Running latex is ok. But the dvi file contain some mistake, the graph overprint on some text and hide it. Then, when I try to convert it to another format

Re: [R] Strange behavior of savePlot

Uwe Ligges a écrit : Christophe Genolini wrote: Uwe Ligges a écrit : Christophe Genolini wrote: Hi all, I am using savePlot in a loop for saving several graph but I get some graph in 553x552, some other in 1920x1119. How comes ? My data are almost all the same (same label, same xlim

Re: [R] Strange behavior of savePlot

Uwe Ligges a écrit : Christophe Genolini wrote: Hi all, I am using savePlot in a loop for saving several graph but I get some graph in 553x552, some other in 1920x1119. How comes ? My data are almost all the same (same label, same xlim / ylim, almost same data. Only the color changes). I

[R] Strange behavior of savePlot

Hi all, I am using savePlot in a loop for saving several graph but I get some graph in 553x552, some other in 1920x1119. How comes ? My data are almost all the same (same label, same xlim / ylim, almost same data. Only the color changes). I save them in bmp. Thanks for your help. Christophe

Re: [R] R-help Digest, Vol 71, Issue 7

Thanks for your answer Here it is : http://christophe.genolini.free.fr/webTutorial/index.php Any comments are welcome... Christophe __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide htt

[R] A (Not So) Short Introduction to S4 (ex Contributed Documentation)

Here is the link : http://christophe.genolini.free.fr/webTutorial/index.php Any comments are welcome. Christophe On Tue, Jan 6, 2009 at 8:17 PM, Ben Bolker wrote: > Christophe Genolini u-paris10.fr> writes: > >> >> Hi the list, >> >> I wrote a tut

[R] Contributed Documentation

Hi the list, I wrote a tutorial about S4. Is it possible to have a link to it in the page "Contributed Documentation" or "R Documentation" on the CRAN web site ? Who shall I contact ? Christophe __ R-help@r-project.org mailing list https://stat.eth

Re: [R] legend at fixed distance form the bottom

started in the correct direction? -- Gregory (Greg) L. Snow Ph.D. Statistical Data Center Intermountain Healthcare [EMAIL PROTECTED] 801.408.8111 -Original Message- From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] project.org] On Behalf Of Christophe Genolini Sent: Monday, Decembe

Re: [R] legend at fixed distance form the bottom

to accomplish and what you mean by fixed distance (number of inches, proportion of device height, margin row, etc.) we may be better able to help. -- Gregory (Greg) L. Snow Ph.D. Statistical Data Center Intermountain Healthcare [EMAIL PROTECTED] 801.408.8111 -Original Message- Fro

Re: [R] legend at fixed distance form the bottom

Lol. To me, a "fixed amount" that depends on the size of the graph is not much fixed... --- 8< --- symboles <- c(3,4,5,6) dn <- rbind(matrix(rnorm(20),,5),matrix(rnorm(20,2),,5)) listSymboles <- rep(symboles,each=2) layout(matrix(c(1,1,1,2,2,3),3)) for(i in 1:3){ plot(dn) legend("top", pch

Re: [R] legend at fixed distance form the bottom

es), legend = c("ane", "cheval", "poney", "mule"), inset = c(0,1.1), horiz = TRUE, xpd = NA) On Fri, Dec 5, 2008 at 8:39 AM, Christophe Genolini <[EMAIL PROTECTED]> wrote: Hi the list I would like to add a legend under a graph but at a fixe

Re: [R] legend at fixed distance form the bottom

PROTECTED] 801.408.8111 -Original Message- From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] project.org] On Behalf Of Christophe Genolini Sent: Friday, December 05, 2008 6:40 AM To: r-help@r-project.org Subject: [R] legend at fixed distance form the bottom Hi the list I would like to

[R] legend at fixed distance form the bottom

Hi the list I would like to add a legend under a graph but at a fixed distance from the graphe. Is it possible ? More precisely, here is my code : --- 8< symboles <- c(3,4,5,6) dn <- rbind(matrix(rnorm(20),,5),matrix(rnorm(20,2),,5)) listSymboles <- rep(symboles,each=2) matplot(t(dn),pch=

Re: [R] path and R CMD check

Uwe Ligges-3 wrote: > > > > Christophe Genolini wrote: >> Hi the list, >> >> When I developpe my code, I put the file that define all the functions >> in ./MyPack/R/prog.R and the tests in ./MyPack/tests/testsProg.R >> The test files start by &

[R] path and R CMD check

Hi the list, When I developpe my code, I put the file that define all the functions in ./MyPack/R/prog.R and the tests in ./MyPack/tests/testsProg.R The test files start by load("../data/myData.rda") source("../R/prog.R") #test function number one... But "R CMD check MyPack" does not find the

Re: [R] Sweave add code \201

Peter Dalgaard a écrit : Christophe Genolini wrote: Hi the list, I do not understand what change in my configuration, but Sweave add the code \201 before each special characters é è à ç ... Does someone know when it come from ? MULE (multilingal environment) in Emacs used to be prone to do

[R] Sweave add code \201

Hi the list, I do not understand what change in my configuration, but Sweave add the code \201 before each special characters é è à ç ... Does someone know when it come from ? Thanks Christophe __ R-help@r-project.org mailing list https://stat.ethz

Re: [R] probleme with R CMD check

2) .userB(3) .privateB(4) userC(5) privateC(6) --- 8< dn.Rda -- dn <- data.frame(age=c(1,2,4,8,12)) save(dn,file=dn.Rda") --- 8< --- DESCRIPTION - Package:packClassic Type: Package Title: A (Not So) Short Introduction To S4 Version: 1.0

Re: [R] R logo

If we knew an elegant one, we'd have an R function to do it ... The R Logo was done "manually" (using software) in several phases IIRC. But yes, indeed, an 'Rfont' package on CRAN would be neat... Martin Maechler, ETH Zurich and R Core Team. I am not sur of what would be neat : a police wi

[R] R logo

Hi the list, I like the R logo (grey C and blue R) very much, specialy the drawing of the letter with border and shadow. I would like to make something closed with some other letters. Does anyone know how to get a similar result ? Christophe __ R-h

[R] A (not so) Short Introduction to S4

Hi the list, After months of keen work (!), thousands of questions on the R-help (and on the French R forum GuR), I am pleased to announce the birth of new a tutorial on S4: *** A (Not So) short Introduction to S4 *** http://christophe.genolini.free.fr/webTutorial/index.html It proba

Re: [R] package under unix

Generally, I like to use a pdf device which can have any number of pages. I am proposing a graphical way a selecting a clusterization based a quality criterion. In order to avoid local maximum, you can build something like 10 000 clusterization. Exporting all of them has no sence. So I open t

[R] cls.attrib and integer

Hi the list, Is it a bug? The function cls.attrib seems to not work with integer : values <- round(runif(50,1,10)) dim(values) <- c(10,5) valuesBis <- as.integer(values) dim(valuesBis) <- c(10,5) cluster <- rep(1:2,5) library(clv) cls.attrib(values,cluster) cls.attrib(valuesBis,cluster) Christop

Re: [R] findGlobals on apply

; On Tue, 8 Apr 2008, Christophe Genolini wrote: > >> >>>> f <- function(x){apply(x,2,mean)} >>>> findGlobals(f) >>> mean is a global variable, so findGlobals gets it right. >> That sound strange to me: a "variable" is something that var

Re: [R] findGlobals on apply

> > f <- function(x){apply(x,2,mean)} > > findGlobals(f) > mean is a global variable, so findGlobals gets it right. That sound strange to me: a "variable" is something that vary... mean does not vary. maen will ge an argument that is a line of x and will make some calculous on it, that is the c

[R] findGlobals on apply

Hi the list, Considere the following: f <- function(x){apply(x,2,mean)} findGlobals(f) findGlobals consideres mean as a global variable, which it is not. Is there a way to tell to findGlobals that mean is a function ? Thanks Christophe __ R-help@r-p

Re: [R] tests Rin Rout

> > See the paragraph in Writing R Extensions which explains this Well, I saw it again and again (before asking on the r-help) but I do not understand. Same for the Kurt Hornik slides on the web. > > Create tests/myPack.R with those lines in it plus lines to actually > run the code. Does it mea

[R] tests Rin Rout

Hi the list, Some rumour (!) say that is it possible to prepare some tests for checking our code using .Rin and .Rout. It seems to be a very good practice, but I did not manage to find information on it. So does someone know how it works ? What are we suppose to write in Rin ? More precisely :

[R] Journal for R

Hi the list I made up a new statistical procedure. I will publish it in a medical journal, but there will be only the way of using it, no calculation or algorithme detail. So is there a journal (I mean scientific journal) with selection commity to submit an article describing the detail of a pa

[R] S4 : the list of all the object

Hi the list, Is it possible to get the list of all the S4 user define classes? I would like to set up a "package.skeleton.S4" but for that, I need the list of the classes... Thanks Christophe __ R-help@r-project.org mailing list https://stat.ethz.ch

[R] Sweave and printing error

Hi the list. I am writing a tutorial for my student using LaTeX and sweave. I include some example that work (obiously) but I would also like to include some example that do NOT work (for pedagogie)... Is it possible ? At this point, I find that : - if there is a error in the code, Sweave stop

[R] S4 : package creation

Hi the list, Using S4, how can we create a package? In "S4 Classes in 15 pages, more or less", they put all the classes definition in a function that will be called at the opening of the library and they add "by hand" a Rd file. Is it the only way ? Is there something like "S4.package.skeleton"

[R] S4 : dumpMethod

Hi the list, I almost finished the green book (chapter 7 and 8 on S4), this is probably one of my last question :-) I hope you will not miss them to much ! Here is my today nighmare: I do not manage to use dumpMethod : setClass("A",representation(a="numeric")) setMethod("plot","A",function(x,y,

Re: [R] setAs vs setIs

I works, great ! So using your code, we can define 'as','as<-' and 'is' with setIt. Is there still any interest using setAs ? Christophe > > It seems to me your problem here is simply that you did not define a > coerce cal in setIs, so it does not know how to turn a C object into a > B object,

[R] setAs vs setIs

Hi the list I am fighting with the twins setAs and setIs... Here are some questions and comments (comments to myself but that migth be wrong, it is why I am posting them) 1. Very surprising : using setIs define 'is', 'as<-' but not 'as' ??? 2. Using setAs define 'as', 'as<-' but not 'is'... What

[R] length of S4

Hi the list, With basic type, length gives the length of the vector Wtih list, length gives the number of item With S4 object, length gives...one. Even with an objet with empty slot. setClass("E",representation(e="numeric")) [1] "E" length(new("E")) [1] 1 setClass("E",representation(e="matrix"))

Re: [R] empty array

ition will probably works in most case, but in S4, the uses of type is an important point, so I need to use matrix where I shall use matrix, even if it is an empty one. Christophe > --- Christophe Genolini <[EMAIL PROTECTED]> wrote: > > >> Hi the list >> >>

[R] empty array

Hi the list Is it possible to create an empty matrix ? I do not mean an matrix with a single value that is NA (which is not empty) but a real empty one, with length=0. I do not understand why we have length(numeric()), length(factor()) and length(character()) to zero, and length(array()) to on

[R] changing the quote

Hi the list, I am using R2.6.2. I don't now why, the quote used in the output of 'new' seams not compatible with Sweave. Is there a way to change them ? Is it something link with R, or link with my computer configuration ? > setClass("E",list(e="factor")) [1] "E" > new("E") An object of class

[R] alias for a class

Hi the list Is it possible to give two names for a class ? One long name for using in programmation, and one short name for the "quick and durty" uses ? With function, we can do mcf <- myCoolFunction <- function(x) With class, I define "clusterizedLongData", I want to use it with the full

Re: [R] Sealed for setGeneric

> an unusual strategy would be to use lockBinding to make the symbol > associated with the generic unchangeable. > This sounds nice, thanks. Why is it unusual ? Any side effect or just the practice? __ R-help@r-project.org mailing list https://stat.

[R] Sealed for setGeneric

Hi the list When two setGeneric occurs on the same function, the second erage the first and erase all the function previously define. Is it possible to prevent that ? Is it possible to declare a setGeneric that can not be erased later ? Something like the |sealed for setMethod...| || |Thanks| ||

[R] Sweave and the prompt

Hi the list I would also like to remove the prompt, in order to let the reader cut-and-paste from pdf to R. So I set the prompt to " " with options(prompt=" ",continue=" ") But it add an extrat space at the start of each line. I also try some code options(prompt="\a",continue="\a") After a big

[R] Sweave and extra line

Hi the list, I am using Sweave. Between the Sinput and the Soutput, there is always an extra line: > 2+2 [1] 4 Is it possible to remove it ? > 2+2 [1] 4 Thanks Christophe __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinf

Re: [R] inheritence in S4

Hi Martin I was not that much speaking about what we can do, but more about what we can't. We can't decide that object will be 'never empty', we have to allow empty oject, otherwise new("A") will not work and that will be problematic. So, at this point, I see : - it is necessary to allow the

Re: [R] inheritence in S4

Thanks Martin Well it works except that "as" seems to not like the "initialize" method : the following code (that is the same than yours with some initialize for A B and C) does not compile. It seems that as(c,"A") does not work if we definie a initialize for A... --- 8< -- setClas

[R] tutorial on codetools

Hi the list Is there any tutorial to learn codetools ? It seems to be a very interesting pacakge, but the help gives not that much detail, and there is not that much examples provided... Christophe __ R-help@r-project.org mailing list https://stat.e

Re: [R] Set without argument

; programming or will have side effect that I do not see ? Christophe > Christophe Genolini <[EMAIL PROTECTED]> writes: > > >> Hi the list, >> >> I am defining S4 objet. Is it possbile to define a method that change >> the slot of an object without using &l

[R] S4 : Signature

Hi the list Is it possible to define a method with a signature that will have more argument than the generic method? For exemple, print has only one argument, plot has two, can I do something like : setMethod("print",signature=c(x="numeric",y="character"),function(x,y,...) .. setMethod("pl

Re: [R] Standard method for S4 object

> /I think your question should be more relevant on Rdev./ ok, I will > Personnally I would find stuff like "names", "$", "$<-", or "[" > useful as these are usual operation with S3 objects. Is it possible in S4 to define "$<-" ? If there is a slot name 'a' in object 'B', I find (in "S4 in 15 p

Re: [R] Hiding a function

n 23/02/2008 5:15 AM, Christophe Genolini wrote: >> Hi the list >> >> Is it possible to 'hide' a function from the user ? I cut a big >> fonction in sub >> function and I would like to hide the sub function, just like if I >> declare them >&g

Re: [R] Set without argument

Thanks a lot > The 'usual' way to write the above code is > > >> a <- imputeMyObj(a) >> :-( I was hopping something like the use of the superassignator <<- inside imputeMyObj (I was hoping even if I did not find it myself)... To bad. But thanks for teaching me 'usual' pratice. It is somet

[R] Standard method for S4 object

Hi the list, I am defining a new class MyClass. Shortly, I will submit a package with it. Before, I would like to know if there is a kind of "non official list" of what method a new S4 object have. More precisely, personnaly, I use 'print', 'summary' and 'plot' a lot. So for my new class, I def

Re: [R] Hiding a function

ata.frame -- > FUNx is available to by.data.frame but is not > visible outside of by.data.frame . > > On Sat, Feb 23, 2008 at 6:09 AM, Duncan Murdoch <[EMAIL PROTECTED]> wrote: > >> On 23/02/2008 5:58 AM, Christophe Genolini wrote: >> >>> Duncan Murd

Re: [R] Hiding a function

ould not do this though. > > G. > > On Sat, Feb 23, 2008 at 11:58:57AM +0100, Christophe Genolini wrote: > [...] > >> If I understand, it is possible only in a package, not in a programme >> (unless the "other ways"), is that it ? >> Ok, thanks. >>

[R] Set without argument

Hi the list, I am defining S4 objet. Is it possbile to define a method that change the slot of an object without using <- ? My object contain a numeric and a matrix. At some point, I would like to impute the missing value in the matrix. So I would like to use something like : -

Re: [R] Hiding a function

Duncan Murdoch a écrit : > On 23/02/2008 5:15 AM, Christophe Genolini wrote: >> Hi the list >> >> Is it possible to 'hide' a function from the user ? I cut a big >> fonction in sub >> function and I would like to hide the sub function, just like i

[R] Hiding a function

Hi the list Is it possible to 'hide' a function from the user ? I cut a big fonction in sub function and I would like to hide the sub function, just like if I declare them in the big function : -- a <- function(x){ b <- function(y){y^2} d <- function(y){y^3} b(x)+d(x)+2 } a(2

Re: [R] learning S4

Robin Hankin a écrit : > Christophe > > you might find the Brobdingnag package on CRAN helpful here. > Yep, I read it and I find it very usefull. A question anyway: Is there a way to change a slot without using the <- ? Instead of > new("obj") > [EMAIL PROTECTED] <- 3 I would like to have > n

Re: [R] Integer vs numeric

x[c(2,4)] work as well Henrik Bengtsson a écrit : > x[1:n] > > /H > > On Jan 29, 2008 5:07 AM, <[EMAIL PROTECTED]> wrote: > >> Seems strange to me to define an operator relatively to a very special case. >> I have to admit that I do not use 1:1e7 every day :-) >> >> Wouldn't it be more appropr

Re: [R] Integer vs numeric

> Further to the above: The help > > ?":" > > says: > > Value: > For numeric arguments [as opposed to factors], > a numeric vector. This will be of type 'integer' > if 'from' and 'to' are both integers and > representable in the integer type, otherwise of > type 'numeric' ??? This is

[R] Integer vs numeric

Hi the list. I do not understand the philosophy behind numeric and integer. - 1 is numeric (which I find surprising) - 2 is numeric. - 1:2 is integer. Why is that ? Christophe __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinf

[R] package manual in pdf

Hi all, I am trying to write a pdf manual for my package. I create a file inst\doc\myDoc.tex. I taught that R CMD build will call latex on this file (like it is said in Writing R extension), but it does not happen. I also notice that a pdf manual is produce automatically but with a not so good pr

[R] [R-pkgs] New package: R to LaTeX Univariate Analyses

rst suggestion is to extend this package to HTML. I will not have time to do it alone. So if some people are interested, two other project are almost open : - R to LaTeX Bivaraite Analysis - R to HTML Univariate Analysis Thanks Christophe Genolini Junior statistician "PSIGIAM: Paris Sud Innov

[R] bug in mmlcr ?

Hi the list. Is there a bug in mmlcr package ? The following code does not compile: mmlcrTest <- function(dataW){ dataL <- reshape(dataW,idvar="id",timevar="T",varying=list(paste("T",0:10,sep="")),direction="long",v.names="score") resultR <- mmlcr(outer= ~ 1 | id, compo

[R] R to LaTeX Univariate Analysis

Hi all Well, first: happy new year... Second: I write a function in R that might interest some other people. On the other hand, I am closer to beginners than experts; I don't know how valuable my code is. I don't know how long it will take to me to create a library and I don't know if it's wor

[R] Rerolling k-means

Hi all I am working on k-means algorithm (in R: kmeans( ) ). The R-help advice us to try several random start in order to avoid local minimum. Does one know if there is a procedure that automaticly run this rerolling and select the best partition ? Or any studies that gives clues on the number

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