Re: [R] How to extract information from .Rdata format

2020-07-31 Thread Rui Barradas
Hello, Inline. Às 05:30 de 01/08/2020, Ana Marija escreveu: do you think that this is useful output from Basics of R? Actually, the answer will be yes, I do. Explanation follows. load("paired_example.Rdata") str(rawdata) num [1:4482, 1:10] 46 4 3 48 1 4 0 60 0 12 ... - attr(*, "dimname

Re: [R] How to extract information from .Rdata format

2020-07-31 Thread Ana Marija
do you think that this is useful output from Basics of R? > load("paired_example.Rdata") > str(rawdata) num [1:4482, 1:10] 46 4 3 48 1 4 0 60 0 12 ... - attr(*, "dimnames")=List of 2 ..$ : chr [1:4482] "gene1" "gene2" "gene3" "gene4" ... ..$ : chr [1:10] "a.cancer" "b.cancer" "c.cancer" "d.ca

Re: [R] How to extract information from .Rdata format

2020-07-31 Thread Bert Gunter
Sarah has explained all. I agree with her about the need for tutorials also. This list cannot substitute for such homework on your own. Bert Gunter "The trouble with having an open mind is that people keep coming along and sticking things into it." -- Opus (aka Berkeley Breathed in his "Bloom Co

Re: [R] How to extract information from .Rdata format

2020-07-31 Thread Ana Marija
It seems that "treatment" and "patient" are just vectors. > treatment [1] "treat" "treat" "treat" "treat" "treat" "control" "control" [8] "control" "control" "control" > patient [1] "a" "b" "c" "d" "e" "a" "b" "c" "d" "e" On Fri, Jul 31, 2020 at 9:53 PM Ana Marija wrote: > > Hi Bert

Re: [R] How to extract information from .Rdata format

2020-07-31 Thread Ana Marija
Hi Bert, it gives me this: > a=load("paired_example.Rdata") > str(a) chr [1:3] "rawdata" "treatment" "patient" I don't know how to extract "treatment" for example in a data frame. I tried this but of no help. > b=a[[2]] > b [1] "treatment" > str(treatment) chr [1:10] "treat" "treat" "treat"

Re: [R] How to extract information from .Rdata format

2020-07-31 Thread Sarah Goslee
Hi Ana, You are making this far too complicated. load("paired_example.Rdata") ls() str(rawdata) str(treatment) str(patient) load() puts all of them into your current environment. If you assign the result of load() to something, in your example a, that object contains the names of the objects,

Re: [R] How to extract information from .Rdata format

2020-07-31 Thread Bert Gunter
What does str(a) give? Bert Gunter "The trouble with having an open mind is that people keep coming along and sticking things into it." -- Opus (aka Berkeley Breathed in his "Bloom County" comic strip ) On Fri, Jul 31, 2020 at 7:18 PM Ana Marija wrote: > Hello, > > I have this file: > > a=l

[R] How to extract information from .Rdata format

2020-07-31 Thread Ana Marija
Hello, I have this file: > a=load("paired_example.Rdata") > a [1] "rawdata" "treatment" "patient" I can extract "rawdata" with: dat<-local(get(load("paired_example.Rdata"))) Can you please advise how would I extract in data frame "treatment" and "patient"? Thanks Ana ___

Re: [R] hist from a list

2020-07-31 Thread Rasmus Liland
On 2020-07-31 10:07 -0500, Joshua Ulrich wrote: | On Fri, Jul 31, 2020 at 9:55 AM Rui Barradas wrote: | | Às 15:44 de 31/07/2020, Michael Dewey escreveu: | | | Dear Pedro | | | | | | Some comments in-line | | | | | | On 30/07/2020 21:16, Pedro páramo wrote: | | | | Hi all, | | | | | | | | I attach

Re: [R] hist from a list

2020-07-31 Thread Joshua Ulrich
Hi Pedro, Another 'best practice' and polite thing to do is link to other places you may have cross-posted. That will give people the opportunity to see if your questions has been answered in another forum. I saw your post on R-SIG-Finance (https://stat.ethz.ch/pipermail/r-sig-finance/2020q3/014

Re: [R] hist from a list

2020-07-31 Thread Rui Barradas
Hello, I second Michael's opinion. When the post's code is very long, there is a tendency to have less answers. Please post the output of dput(head(bwchist, 30)) It's much shorter code and it recreates the data so we will be able to see what's wrong and try to find a solution. Hope this

Re: [R] hist from a list

2020-07-31 Thread Michael Dewey
Dear Pedro Some comments in-line On 30/07/2020 21:16, Pedro páramo wrote: Hi all, I attach my code, the think is I want to make a bar plot the last variable called "bwchist" so the X axis are "Accion" and the y axis are "reval" values. I have prove class(bwchist) and says dataframe but its

[R] hist from a list

2020-07-31 Thread Pedro páramo
Hi all, I attach my code, the think is I want to make a bar plot the last variable called "bwchist" so the X axis are "Accion" and the y axis are "reval" values. I have prove class(bwchist) and says dataframe but its still a list because it says me I have prove to unlist, but it doesnt work