Re: [R] running Rmpi with SGE on a cluster

2018-07-01 Thread Jérémie Juste
Hello, Many thanks to you. Best regards, Jeremie On Mon, Jul 2, 2018 at 7:54 AM, Loris Bennett wrote: > David Winsemius writes: > > >> On Jul 1, 2018, at 6:32 AM, Jeremie Juste > wrote: > >> > >> > >> Hello, > >> > >> I would like to know how to use Rmpi on a cluster but usually the > >>

Re: [R] running Rmpi with SGE on a cluster

2018-07-01 Thread Loris Bennett
David Winsemius writes: >> On Jul 1, 2018, at 6:32 AM, Jeremie Juste wrote: >> >> >> Hello, >> >> I would like to know how to use Rmpi on a cluster but usually the >> workflow of the cluster uses sun grid engine to launch jobs. >> >> I found this reference on the web >> http://borisv.lk.net/

Re: [R] Convert list of data frames to one data frame

2018-07-01 Thread Ira Sharenow via R-help
My final post for thisthread! Since I first asked myquestion on Stack Overflow, I posted all the solutions along with my timingstudy there. https://stackoverflow.com/questions/50807970/converting-a-list-of-data-frames-not-a-simple-rbind-second-row-to-new-columns/51129202#51129202 Thanks again

Re: [R] parallel processing in r...

2018-07-01 Thread Christofer Bogaso
Hi, On ' how to use "top" inside the R prompt? ' you can use system('top') command. Thanks, On Sun, Jul 1, 2018 at 9:53 PM Benoit Vaillant wrote: > Hello, > > On Sun, Jul 01, 2018 at 11:31:29AM +, akshay kulkarni wrote: > > I tried "top" at the bash prompt, but it provides a way to measure

Re: [R] parallel processing in r...

2018-07-01 Thread Benoit Vaillant
Hello, On Sun, Jul 01, 2018 at 11:31:29AM +, akshay kulkarni wrote: > I tried "top" at the bash prompt, but it provides a way to measure > CPU performance of the existing processes. I want to check the CPU > usage of the execution of an R function. Try to open two bash prompts, in one use R a

Re: [R] running Rmpi with SGE on a cluster

2018-07-01 Thread David Winsemius
> On Jul 1, 2018, at 6:32 AM, Jeremie Juste wrote: > > > Hello, > > I would like to know how to use Rmpi on a cluster but usually the > workflow of the cluster uses sun grid engine to launch jobs. > > I found this reference on the web > http://borisv.lk.net/howtos/grid-mpi-r-howto.html. > >

Re: [R] A question on Statistics

2018-07-01 Thread Christofer Bogaso
I derive posting guide from https://www.r-project.org/posting-guide.html I am imagining a distribution where mean is zero but there are few large observations in the positive side which are not very frequent. On Sun, Jul 1, 2018 at 8:29 PM Bert Gunter wrote: > From the posting guide: > > "*R-he

Re: [R] A question on Statistics

2018-07-01 Thread Bert Gunter
>From the posting guide: "*R-help* is intended to be comprehensible to people who want to use R to solve problems but who are not necessarily interested in or knowledgeable about programming." This says to me that R-help is for general questions about R programming, not statistics, though I grant

[R] running Rmpi with SGE on a cluster

2018-07-01 Thread Jeremie Juste
Hello, I would like to know how to use Rmpi on a cluster but usually the workflow of the cluster uses sun grid engine to launch jobs. I found this reference on the web http://borisv.lk.net/howtos/grid-mpi-r-howto.html. But I could not even reproduce that example some errors with > n.cores <- m

Re: [R] A question on Statistics

2018-07-01 Thread Christofer Bogaso
Hi, I could post in StackExchange for sure, however I dont think R-help posting guide discourage asking a question about Statistics, atleast formally. I could further clarify if my question is not elaborate enough. And many apologies if it is very trivial - however still I am looking for 2nd opin

Re: [R] parallel processing in r...

2018-07-01 Thread akshay kulkarni
dear Members, Thanks for the reply..I do have another issue; I will be highly obliged if you answer it: I tried "top" at the bash prompt, but it provides a way to measure CPU performance of the existing processes. I want to check the CPU usage of the executi