[R] About doing figures

2017-07-15 Thread lily li
Hi R users, I still have the problem about plotting. I wanted to put the datasets on one figure, x-axis represents values B, y-axis represents values C, while different colors label column A. Each record uses a circle on the figure, while hollow circles represent DF=1 and solid circles represent D

Re: [R] readLines without skipNul=TRUE causes crash

2017-07-15 Thread William Dunlap via R-help
I see the problem on Windows 10, R-3.4.0, R.exe. It is not compiled for debugging but gdb gives some information when I attach the debugger after the 'R..has stopped working' popup appears. I don't know how reliable it is: (gdb) info threads Id Target Id Frame * 4Thread 11848.0x1

Re: [R] readLines without skipNul=TRUE causes crash

2017-07-15 Thread Jeff Newmiller
I am not able to reproduce your segfault on a Windows 7 platform either: ## fn1 <- "d:/DADOS_ENEM_2009.txt" sessionInfo() ## R version 3.4.1 (2017-06-30) ## Platform: x86_64-w64-mingw32/x64 (64-bit) ## Running under: Windows 7 x64 (build 7601) Service Pack 1 ## ## Matrix p

Re: [R] select from data frame

2017-07-15 Thread Bert Gunter
... and here is a slightly cleaner and more transparent way of doing the same thing (setdiff() does the matching) > with(df, setdiff(ID,ID[samples %in% c("B","C") ])) [1] 3 -- Bert Bert Gunter "The trouble with having an open mind is that people keep coming along and sticking things into it."

Re: [R] readLines without skipNul=TRUE causes crash

2017-07-15 Thread Duncan Murdoch
On 15/07/2017 11:33 AM, Anthony Damico wrote: hi, i realized that the segfault happens on the text file in a new R session. so, creating the segfault-generating text file requires a contributed package, but prompting the actual segfault does not -- pretty sure that means this is a base R bug? s

Re: [R] readLines without skipNul=TRUE causes crash

2017-07-15 Thread Jeff Newmiller
I am not able to reproduce this on a Linux platform: ###3 fn1 <- "/home/jdnewmil/Downloads/Microdados ENEM 2009/Dados Enem 2009/DADOS_ENEM_2009.txt" sessionInfo() ## R version 3.4.1 (2017-06-30) ## Platform: x86_64-pc-linux-gnu (64-bit) ## Running under: Ubuntu 14.04.5 LTS ##

Re: [R] select from data frame

2017-07-15 Thread Bert Gunter
If I understand correctly, no looping (ave(), for()) or type casting (as.character()) is needed -- indexing and matching suffice: > with(df, ID[!ID %in% unique(ID[samples %in% c("B","C") ])]) [1] 3 3 Cheers, Bert Bert Gunter "The trouble with having an open mind is that people keep coming a

Re: [R] readLines without skipNul=TRUE causes crash

2017-07-15 Thread Duncan Murdoch
On 15/07/2017 11:33 AM, Anthony Damico wrote: hi, i realized that the segfault happens on the text file in a new R session. so, creating the segfault-generating text file requires a contributed package, but prompting the actual segfault does not -- pretty sure that means this is a base R bug? s

Re: [R] select from data frame

2017-07-15 Thread David Winsemius
> On Jul 15, 2017, at 4:01 AM, Andras Farkas via R-help > wrote: > > Dear All, > > wonder if you could please assist with the following > > df<-data.frame(ID=c(1,1,1,2,2,3,3,4,4,5,5),samples=c("A","B","C","A","C","A","D","C","B","A","C")) > > from this data frame the goal is to extract the

Re: [R] readLines without skipNul=TRUE causes crash

2017-07-15 Thread Anthony Damico
hi, i realized that the segfault happens on the text file in a new R session. so, creating the segfault-generating text file requires a contributed package, but prompting the actual segfault does not -- pretty sure that means this is a base R bug? submitted here: https://bugs.r-project.org/bugzil

[R] select from data frame

2017-07-15 Thread Andras Farkas via R-help
Dear All, wonder if you could please assist with the following df<-data.frame(ID=c(1,1,1,2,2,3,3,4,4,5,5),samples=c("A","B","C","A","C","A","D","C","B","A","C")) from this data frame the goal is to extract the value of 3 from the ID column based on the logic that the ID=3 in the data frame has

Re: [R] readLines without skipNul=TRUE causes crash

2017-07-15 Thread Anthony Damico
hi, thanks Dr. Murdoch i'd appreciate if anyone on r-help could help me narrow this down? i believe the segfault occurs because there's a single line with 4GB and also embedded nuls, but i am not sure how to artificially construct that? the lodown package can be removed from my example.. it i

Re: [R] readLines without skipNul=TRUE causes crash

2017-07-15 Thread Duncan Murdoch
On 15/07/2017 7:35 AM, Anthony Damico wrote: hello, the last line of the code below causes a segfault for me on 3.4.1. i think i should submit to https://bugs.r-project.org/ unless others have advice? thanks Segfaults are usually worth reporting as bugs. Try to come up with a self-contained

[R] readLines without skipNul=TRUE causes crash

2017-07-15 Thread Anthony Damico
hello, the last line of the code below causes a segfault for me on 3.4.1. i think i should submit to https://bugs.r-project.org/ unless others have advice? thanks install.packages( "devtools" ) devtools::install_github("ajdamico/lodown") devtools::install_github("jimhester/archive") file_f