Re: [Rd] R 2.11.0 on RHEL5 / RODBC

2010-05-12 Thread Prof Brian Ripley
On Wed, 12 May 2010, Chuck White wrote: I am compiling R 2.11.0 on a RHEL5.3 box using the following settings ./configure --with-readline=yes --enable-R-shlib=yes --with-x=yes --with-blas="-llibptf77blas -lpthread -llibatlas" --prefix=/usr/local/R-2.11.0 JAVA_HOME=$JAVA_HOME CPPFLAGS="-I/usr/

[Rd] R 2.11.0 on RHEL5 / RODBC

2010-05-12 Thread Chuck White
I am compiling R 2.11.0 on a RHEL5.3 box using the following settings ./configure --with-readline=yes --enable-R-shlib=yes --with-x=yes --with-blas="-llibptf77blas -lpthread -llibatlas" --prefix=/usr/local/R-2.11.0 JAVA_HOME=$JAVA_HOME CPPFLAGS="-I/usr/local/unixODBC-2.3.0/include" I have compi

Re: [Rd] R 2.11.0 on RHEL5

2010-05-05 Thread Uwe Ligges
On 05.05.2010 16:54, Chuck White wrote: Thanks again for your note. I am now compiling using: --with-readline=yes --enable-R-shlib=yes --with-x=yes --with-blas="-llibptf77blas -lpthread -llibatlas" --prefix=/usr/local/R-2.11.0 Yes, that's essentially what I use (except the shlib flags). U

Re: [Rd] R 2.11.0 on RHEL5

2010-05-05 Thread Chuck White
Thanks again for your note. I am now compiling using: --with-readline=yes --enable-R-shlib=yes --with-x=yes --with-blas="-llibptf77blas -lpthread -llibatlas" --prefix=/usr/local/R-2.11.0 The above configuration is creating libRlapack.so as well. Do you specify --with-lapack as well? If so, wha

Re: [Rd] R 2.11.0 on RHEL5

2010-05-05 Thread Uwe Ligges
On 05.05.2010 04:52, Chuck White wrote: Thank you for your response. I did look in the suggested manual under A.3.1.5 Shared BLAS. Here are my steps: compiled R using --with-readline=yes --enable-R-shlib=yes --enable-BLAS-shlib=yes --with-x=yes --prefix=/usr/local/R-2.11.0 Why do you want

Re: [Rd] R 2.11.0 on RHEL5

2010-05-04 Thread Chuck White
Thank you for your response. I did look in the suggested manual under A.3.1.5 Shared BLAS. Here are my steps: compiled R using --with-readline=yes --enable-R-shlib=yes --enable-BLAS-shlib=yes --with-x=yes --prefix=/usr/local/R-2.11.0 Compiled LAPACK first and then ATLAS using http://www.scipy.

Re: [Rd] R 2.11.0 on RHEL5

2010-05-03 Thread Uwe Ligges
This is explained in detail in the manual "R Installation and Administration". Best, Uwe Ligges On 03.05.2010 06:02, Chuck White wrote: I have built lapack-3.2 and atlas3.8.3 for a RHEL5.3 VM. The following files have been created -- libatlas (.a& .so), libcblas (.a& .so), libf77blas (.a&

[Rd] R 2.11.0 on RHEL5

2010-05-02 Thread Chuck White
I have built lapack-3.2 and atlas3.8.3 for a RHEL5.3 VM. The following files have been created -- libatlas (.a & .so), libcblas (.a & .so), libf77blas (.a & .so), liblapack (.a & .so), libptcblas (.a & .so), libptf77blas (.a & .so) and libstatatlas.a. When building R 2.11.0, I would like to be

[Rd] R 2.11.0 on RHEL5

2010-05-02 Thread Chuck White
I have built lapack-3.2 and atlas3.8.3 for a RHEL5.3 VM. The following files have been created -- libatlas (.a & .so), libcblas (.a & .so), libf77blas (.a & .so), liblapack (.a & .so), libptcblas (.a & .so), libptf77blas (.a & .so) and libstatatlas.a. When building R 2.11.0, I would like to be