1) For a source package, download it and unpack the tarball.
2) Read the instructions: you missed the README file, which starts
The rjags package is an interface to the JAGS library. In order to
build a binary package, or install from source, you must have a
matching installation of th
Recently installed 2.12.1 on my CentOS 5.5 box. Install of R went
without incident, and packages downloaded and compiled fine. With one
exception -- my interest is somewhat in the problems with this
particular package, but more in terms of 'what to do if/when a package'
doesn't compile properly
Brian -
Cheers - followups below.
Prof Brian Ripley wrote:
On Fri, 26 Jun 2009, Evan Cooch wrote:
So, tried again from scratch. Again, CentOS 5.3, which is essentially
RHEL 5.3.
./configure --with-blas="-L/opt/acml4.3.0/gfortran64/lib -lacml"
In config.log, get things like
configure:37199
Ran make check-devel and make check-all (for more comprehensive
testing) - same error messages - not even sure where to look in tests
or Examples for 'help' - no logs, or files with .fail extension or
anything I might *guess* to look for.
I've never had this problem before - the only thing di
Trying to get R 2.90 compiled on a CentOS 5.3 (i.e., RHEL 5.3) box,
64-bit. Machine has Opteron chips, so downloaded and installed ACML
4.3.0. Configured R with
./configure --with-lapack="-L/usr/lib64"
--with-blas="-L/opt/acml4.2.0/gfortran64/lib -lacml" --with-tcltk
Absolutely no problems/e
That was it - rebuilt R with --with-tcltk, then tried rebuilding rjags.
Seems to have done the trick.
egc wrote:
Quick followup. Confirmed that TCl/Tk are both installed on the
machine (they are, in both 32- and 64-bit flavours), as are all tcl
and tk-related libs, devel packages, and about
linux installs there may be some issues with
playing nice if both 32- and 64-bit versions of Tcl/Tk are installed.
Original Message
Subject:[Rd] problems installing rjags | tcltk
Date: Thu, 30 Apr 2009 11:26:43 -0400
From: egc
To: r-devel@r-project.org
Greetings.
Running Fedora Cora 8 on multi-Opteron system - full 32- and 64-bit libs
installed (R compiled 64-bit on this machine). R 2.9.0 - libs sitting in
/usr/local/lib64/R/library. Trying to install JAGS, with rjags. Partial
success.
For JAGS install:
|./configure --with-jags-modules=/usr
A while ago I decided to simply download and install every package on CRAN
(disk space is cheap these days...). In the process, I kept loose track of
which packages generated one or more 'compilation errors' during the install
process (machine runs 64-bit Fedora 8, gcc 4.1 etc. etc). Most of the er
Several good suggestions were sent my way - much appreciated. In my
experience, any solution to a problem that gives a user write access to
anything other than their own /home directories is a disaster waiting to
happen (spoken as someone who has burned in past doing otherwise). So, I'll
pursue som
I handle SysAdmin for a multi-user Linux box, with R 2.7.1 compiled and
installed to make usee of ACML (Opteron chips). The library files (packages)
are installed to /usr/local/lib64/R/library
Everything works as it should, except for the following. Say I have a user
(an R developer) who has devel
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