Re: [Rd] seeing an S4 method, not using it

2008-05-24 Thread Thibaut Jombart
iously-cited post. I too believe it is still better not to load the package automatically than loading it with undesired side-effects. Maybe a word about this issue would be useful in the manpage of 'show'? Best, Thibaut. ########## Thibaut JOMBART CNRS UMR

[Rd] seeing an S4 method, not using it

2008-05-23 Thread Thibaut Jombart
US.UTF-8;LC_MONETARY=C;LC_MESSAGES=en_US.UTF-8;LC_PAPER=en_US.UTF-8;LC_NAME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=en_US.UTF-8;LC_IDENTIFICATION=C attached base packages: [1] datasets utils stats graphics grDevices methods base other attached packages: [1] pixmap_0.4-7 ade4_1.4-8 MASS_7.2-42 lo

Re: [Rd] Fortran underscore problem persists on Linux x86/64 (PR#11206)

2008-04-20 Thread Thibaut Jombart
o: $(F77) $(ALL_FFLAGS) -c $< -o $@ .f95.o: $(FC) $(PKG_FCFLAGS) $(FCPICFLAGS) $(FCFLAGS) -c $< -o $@ .f90.o: $(FC) $(PKG_FCFLAGS) $(FCPICFLAGS) $(FCFLAGS) -c $< -o $@ # end Makeconf Not surprisingly, this also fixed the issue with deSolve: > l

Re: [Rd] Fortran underscore problem persists on Linux x86/64 (PR#11206)

2008-04-20 Thread Thibaut Jombart
base >> >> other attached packages: >> [1] tripack_1.2-11 >> >> loaded via a namespace (and not attached): >> [1] tools_2.7.0 >> ### >> >> Best regards, >> >> Thibaut. > > -- ## Thibaut JOMBART CNRS UMR 5558 -

Re: [Rd] Fortran underscore problem persists on Linux x86/64 (PR#11206)

2008-04-20 Thread Thibaut Jombart
ot;class") [1] "NativeSymbolInfo" > sessionInfo() R version 2.7.0 RC (2008-04-15 r45347) x86_64-unknown-linux-gnu locale: LC_CTYPE=fr_FR.UTF-8;LC_NUMERIC=C;LC_TIME=fr_FR.UTF-8;LC_COLLATE=fr_FR.UTF-8;LC_MONETARY=C;LC_MESSAGES=fr_FR.UTF-8;LC_PAPER=fr_FR.UTF-8;LC_NAME=C;LC_A

Re: [Rd] Standard method for S4 object

2008-02-26 Thread Thibaut Jombart
Oleg Sklyar wrote: > similar. S3 gives more freedom in assigning new attributes, but this > freedom also means that one has little control over the structure of an > object making it, for example, more difficult to use with C/C++ code. > Are there any specific benefits in not using S4 and slots

[Rd] using example() with S4 documentation

2007-12-20 Thread Thibaut Jombart
example" without success... Thanks in advance. Cheers, Thibaut. -- ## Thibaut JOMBART CNRS UMR 5558 - Laboratoire de Biométrie et Biologie Evolutive Universite Lyon 1 43 bd du 11 novembre 1918 69622 Villeurbanne Cedex Tél. : 04.72.43.29.35 Fax : 04.72.43.13.88 [EMAIL PROTECTED] http://lbbe.univ-lyon

Re: [Rd] possible bug in model.frame.default

2007-03-07 Thread Thibaut Jombart
Duncan Murdoch wrote: > On 3/7/2007 9:47 AM, Thibaut Jombart wrote: > >> Dear list, >> >> I may have found a bug in model.frame.default (called by the lm >> function). >> The problem arises in my R dev version but not in my R 2.4.0. >> Here is my config

[Rd] possible bug in model.frame.default

2007-03-07 Thread Thibaut Jombart
orrect pour la variable '(weights)' I couldn't go further because of the .Internal. I tried to googlise this, but I found no such problem reported recently. Can anyone tell if this is actually a bug? (In case not, please tell me where I got wrong). Regards, Thibaut. -- ###

Re: [Rd] Wishlist: Sweave: allow line breaks after forward slashes (PR#9444)

2007-01-18 Thread Thibaut Jombart
or at least to scarce to add an option which would seem quite surprising to most of the R users. However, anyone meeting this problem would now be able to correct it using your patch ;-) Regards, Thibaut. -- ## Thibaut JOMBART CNRS UMR 5558 - Laboratoire de

Re: [Rd] Installation, permissions of /usr/local/lib/R (PR#9054)

2006-07-02 Thread Thibaut Jombart
you try: chown your-user-name /usr/local/lib/R/ -R ? Or, if you intend to make R available to several users, create a R users group and then type the previous command replacing "your-user-name" by "R-users-group-name". Maybe this would help. Thibaut. --

[Rd] pixmaps and R

2006-04-03 Thread Thibaut Jombart
if compressed pictures could be stored in R? And if yes, how ? Thanks, Thibaut. -- ## Thibaut JOMBART CNRS UMR 5558 - Laboratoire de Biométrie et Biologie Evolutive Universite Lyon 1 43 bd du 11 novembre 1918 69622 Villeurbanne Cedex Tél. : 04.72.43.29.35 Fax : 04.72.43.13.88 [EMAIL PROTECTED]

[Rd] Sweaving in png

2006-03-24 Thread Thibaut Jombart
with no detected problem. Does someone find this useful, and/or were there better solutions I missed? Regards, Thibaut Jombart . -- ## Thibaut JOMBART CNRS UMR 5558 - Laboratoire de Biométrie et Biologie Evolutive Universite Lyon 1 43 bd du 11 novembre 1918 6