Re: [Rd] inflate zlib compressed data using base R or CRAN package?

2013-11-27 Thread Dirk Eddelbuettel
On 27 November 2013 at 17:30, Murray Stokely wrote: | I think none of these examples describe a zlib compressed data block inside a | binary file that the OP asked about, as all of your examples are e.g. | prepending gzip or zip headers.  Yes I fear I have no real idea what Greg is/was talking ab

Re: [Rd] inflate zlib compressed data using base R or CRAN package?

2013-11-27 Thread Murray Stokely
I think none of these examples describe a zlib compressed data block inside a binary file that the OP asked about, as all of your examples are e.g. prepending gzip or zip headers. Greg, is memDecompress what you are looking for? - Murray On Wed, Nov 27, 2013 at 5:22 PM, Dirk Eddelbue

Re: [Rd] inflate zlib compressed data using base R or CRAN package?

2013-11-27 Thread Dirk Eddelbuettel
On 27 November 2013 at 18:38, Dirk Eddelbuettel wrote: | | On 27 November 2013 at 23:49, Dr Gregory Jefferis wrote: | | I have a binary file type that includes a zlib compressed data block (ie | | not gzip). Is anyone aware of a way using base R or a CRAN package to | | decompress this kind of

Re: [Rd] inflate zlib compressed data using base R or CRAN package?

2013-11-27 Thread Dirk Eddelbuettel
On 27 November 2013 at 23:49, Dr Gregory Jefferis wrote: | I have a binary file type that includes a zlib compressed data block (ie | not gzip). Is anyone aware of a way using base R or a CRAN package to | decompress this kind of data (from disk or memory). So far I have found | Rcompression::d

[Rd] inflate zlib compressed data using base R or CRAN package?

2013-11-27 Thread Dr Gregory Jefferis
Hello, I have a binary file type that includes a zlib compressed data block (ie not gzip). Is anyone aware of a way using base R or a CRAN package to decompress this kind of data (from disk or memory). So far I have found Rcompression::decompress on omegahat, but I would prefer to keep depend

Re: [Rd] Checking packages with address sanitizer

2013-11-27 Thread Prof Brian Ripley
On 27/11/2013 18:45, Simon Urbanek wrote: On Nov 27, 2013, at 12:36 PM, wokai wrote: I was recently challenged to correct my package source (rbamtools) because there were issues reported by address sanitizer. Therefore the problem of installing and running instrumented (R +) package code aris

Re: [Rd] Checking packages with address sanitizer

2013-11-27 Thread Simon Urbanek
On Nov 27, 2013, at 12:36 PM, wokai wrote: > I was recently challenged to correct my package source (rbamtools) because > there were issues reported by address sanitizer. > Therefore the problem of installing and running instrumented (R +) package > code arises. > > Regrettably up to now, I fou

[Rd] Checking packages with address sanitizer

2013-11-27 Thread wokai
I was recently challenged to correct my package source (rbamtools) because there were issues reported by address sanitizer. Therefore the problem of installing and running instrumented (R +) package code arises. Regrettably up to now, I found no way to use the address sanitizer, neither for a smal

Re: [Rd] Blank lines in DESCRIPTION

2013-11-27 Thread Laurent Gatto
> Laurent, > > blank lines between records are not allowed in DESCRIPTION, because > they separate paragraphs in DCF and a package must consist of a single > paragraph. This properly is used by R for multi-package DCF files > where each paragraph defines one package. Blank lines at the end may > b