Re: [Rd] When collected warnings exceeds 50

2011-11-10 Thread Jeffrey Horner
On Thu, Nov 10, 2011 at 10:54 PM, Jeffrey Horner wrote: > Hi, > > I've been tracking down a memory leak in an rApache application, > http://data.vanderbilt.edu/rapache/bbplot. The code was deployed in > 2007 and has survived numerous upgrades of both R and rApache > (including upgrades and bugs in

[Rd] When collected warnings exceeds 50

2011-11-10 Thread Jeffrey Horner
Hi, I've been tracking down a memory leak in an rApache application, http://data.vanderbilt.edu/rapache/bbplot. The code was deployed in 2007 and has survived numerous upgrades of both R and rApache (including upgrades and bugs in RMySQL). It's written in such a way so that web crawlers will downl

Re: [Rd] assistance building R on RHEL5

2011-11-10 Thread Mike Dahman
Thanks for the tips. It appears as the root cause was indeed the fortran/gcc packages. There was a mix of the gcc packages and gcc 44 packages. I removed the gcc44s and installed the gcc-fortran, put the original configure script back and compilation completed. gcc.x86_64 gcc-c++.x86_64 gcc-gfort

[Rd] url() does not decode when writing local files

2011-11-10 Thread Michael Lawrence
The url() function does not seem to decode a URL, at least when creating local files. For example, if "%20" is used instead of " ", the "%20" will be included verbatim in the file name. In my opinion, it should perform the replacement, i.e., the equivalent of URLdecode(). And really, it should thr

Re: [Rd] assistance building R on RHEL5

2011-11-10 Thread Prof Brian Ripley
On Wed, 9 Nov 2011, Mike Dahman wrote: I have gotten this error while attempting to build R-2.13.2 and R-2.14.0 using ./configure --with-x=no --enable-R-shlib, and ./configure --with-x=no Hmm, gcc44 is unlikely to be a Fortran compiler. You should not be patching the configure script, rather

Re: [Rd] Define S4 methods for 'plot'

2011-11-10 Thread cgenolin
I works, thank you very much. -- View this message in context: http://r.789695.n4.nabble.com/Define-S4-methods-for-plot-tp4020750p4023508.html Sent from the R devel mailing list archive at Nabble.com. __ R-devel@r-project.org mailing list https://stat.

[Rd] assistance building R on RHEL5

2011-11-10 Thread Mike Dahman
I have gotten this error while attempting to build R-2.13.2 and R-2.14.0 using ./configure --with-x=no --enable-R-shlib, and ./configure --with-x=no Red Hat Enterprise Linux Server release 5.6 (Tikanga) = Warning in solve.default(rgb) : unable to load shared object '/u