[Python-modules-team] Bug#606528: sympy: please run tests at build time

2010-12-12 Thread Ondrej Certik
On Fri, Dec 10, 2010 at 10:57 AM, Jakub Wilk wrote: > * Ondrej Certik , 2010-12-09, 15:23: >>> >>> Sympy comes with a test suite, so it would be nice if it could be >>> run at build time, preferably with all supported Python versions. >> >> It takes s

[Python-modules-team] Bug#606528: Bug#606528: sympy: please run tests at build time

2010-12-09 Thread Ondrej Certik
On Thu, Dec 9, 2010 at 3:36 PM, Sandro Tosi wrote: > Hi Ondrej, > > On 2010-12-10, Ondrej Certik wrote: >> On Thu, Dec 9, 2010 at 2:53 PM, Jakub Wilk wrote: >>> Source: sympy >>> Version: 0.6.7-1.1 >>> >>> Sympy comes with a test suite, so it

[Python-modules-team] Bug#606528: sympy: please run tests at build time

2010-12-09 Thread Ondrej Certik
On Thu, Dec 9, 2010 at 3:23 PM, Ondrej Certik wrote: > On Thu, Dec 9, 2010 at 2:53 PM, Jakub Wilk wrote: >> Source: sympy >> Version: 0.6.7-1.1 >> >> Sympy comes with a test suite, so it would be nice if it could be >> run at build time, preferably with all

[Python-modules-team] Bug#606528: sympy: please run tests at build time

2010-12-09 Thread Ondrej Certik
On Thu, Dec 9, 2010 at 2:53 PM, Jakub Wilk wrote: > Source: sympy > Version: 0.6.7-1.1 > > Sympy comes with a test suite, so it would be nice if it could be > run at build time, preferably with all supported Python versions. It takes several minutes to run. Are you sure it's a good idea? What hap

Re: [Python-modules-team] [Python-apps-team] Bug#597848: (cython: fresh upstream is available (0.13)) -- evas, ecore, djvu FTBFS

2010-10-09 Thread Ondrej Certik
Hi Yarik, On Sat, Oct 9, 2010 at 5:13 PM, Yaroslav Halchenko wrote: > uploaded 0.13 to experimental since all fixes/workarounds for depending > packages are known now and there is a demand for 0.13 to be available Thanks for this! Ondrej ___ Python-m

[Python-modules-team] Bug#559916: Bug#559916: Lots of code duplication because this is still unresolved

2010-09-30 Thread Ondrej Certik
On Thu, Sep 30, 2010 at 3:46 PM, Michael Hanke wrote: > On Thu, Sep 30, 2010 at 11:56:03PM +0200, Sandro Tosi wrote: >> Thanks for your interest in this bug; are you also going a bit further >> and propose a patch to fix it (this would actually help to resolve >> this bug)? > > I might. However, p

Re: [Python-modules-team] Bug#597848: (cython: fresh upstream is available (0.13)) -- evas, ecore, djvu FTBFS

2010-09-28 Thread Ondrej Certik
On Tue, Sep 28, 2010 at 4:03 PM, Jakub Wilk wrote: > * Yaroslav Halchenko , 2010-09-27, 10:21: >> >>        *$> >>  PYTHONPATH=/home/yoh/deb/debs/build-area/cython-test-bdepeds/python-djvulibre-0.1.18/build/lib.linux-x86_64-2.6 >> python -c 'from djvu.const import *' >>        Traceback (most rece

[Python-modules-team] Bug#592563: sympy.galgebra.latex_ex.xdvi() creates a file named NUL on non-Linux architectures

2010-08-10 Thread Ondrej Certik
Hi Jakub, On Tue, Aug 10, 2010 at 3:29 PM, Jakub Wilk wrote: > Package: python-sympy > Version: 0.6.7-1.1 > Severity: normal > User: debian-...@lists.debian.org > Usertags: kfreebsd > Tags: patch > > $ ls -l NUL > ls: cannot access NUL: No such file or directory > $ python sympy-NUL.py $ ls -l NU

[Python-modules-team] Bug#589592: numpy.get_include() returns the wrong string

2010-07-20 Thread Ondrej Certik
On Tue, Jul 20, 2010 at 4:16 AM, David Ham wrote: > I think this error is similar to one I am seeing and it appears to be caused > by numpy.get_include() returning the wrong string. > > python -c 'import numpy; print numpy.get_include()' > > produces: > > /usr/lib/pymodules/python2.6/numpy/core/in

[Python-modules-team] Bug#585334: python-sympy: Python string exceptions no more allowed in Python 2.6

2010-06-09 Thread Ondrej Certik
On Wed, Jun 9, 2010 at 3:19 PM, Sandro Tosi wrote: > Package: python-sympy > Version: 0.6.7-1.1 > Severity: minor > User: debian-pyt...@lists.debian.org > Usertags: python2.6 > > Hello, > One of the changes brought by Python 2.6 is the removal of string > exceptions, so they won't work in Python 2

[Python-modules-team] Bug#459716: time to close this bug? ;)

2009-12-26 Thread Ondrej Certik
Hey Yaroslav! On Wed, Dec 23, 2009 at 3:17 AM, Yaroslav Halchenko wrote: > Hi Ondrej, > > It seems to be good time to have this bug finally "resolved" and closed > since you, Ondrej, seems have packaged pyglet long ago and it still > alive in Debian ;) Yes, you are right. :) > > It is especiall

[Python-modules-team] Bug#541746: mpmath is bundled

2009-08-16 Thread Ondrej Certik
On Sat, Aug 15, 2009 at 9:38 PM, Seo Sanghyeon wrote: > Package: python-sympy > Version: 0.6.4-1 > Severity: wishlist > > python-sympy bundles mpmath. It should use python-mpmath package instead. > > /usr/share/python-support/python-sympy/sympy/mpmath/__init__.py claims > its version is 0.11, but s

[Python-modules-team] Bug#521525: python-numpy: FTBFS: Fails to install f2py wrapper

2009-07-03 Thread Ondrej Certik
On Fri, Jul 3, 2009 at 3:27 AM, Cyril Brulebois wrote: > tag 521525 patch pending > thanks > > Daniel Schepler (27/03/2009): >> ... >> : # Adding links to manpages >> mkdir -p debian/python-numpy/usr/share/man/man1 >> for v in 2.5 2.4; do \ >>           ln -sf f2py.1 debian/python-numpy/usr/share/

[Python-modules-team] Bug#524073: python-numpy: please split atlas support into an optional package

2009-04-14 Thread Ondrej Certik
On Tue, Apr 14, 2009 at 2:51 PM, Neil Williams wrote: > On Tue, 14 Apr 2009 10:23:11 -0700 > Ondrej Certik wrote: > >> On Tue, Apr 14, 2009 at 10:09 AM, Neil Williams wrote: >> > Package: python-numpy >> > Version: 1:1.2.1-1 >> > Severity: normal

[Python-modules-team] Bug#524073: python-numpy: please split atlas support into an optional package

2009-04-14 Thread Ondrej Certik
On Tue, Apr 14, 2009 at 10:09 AM, Neil Williams wrote: > Package: python-numpy > Version: 1:1.2.1-1 > Severity: normal > > In #489253, ATLAS support was re-enabled. > > In #519233, python-gtk2 was made to depend on python-numpy. > > The net result is that something as small and simple as wicd now

[Python-modules-team] Bug#522771: python-petsc4py: import ctypes

2009-04-06 Thread Ondrej Certik
On Mon, Apr 6, 2009 at 4:16 AM, LUK ShunTim wrote: > Package: python-petsc4py > Version: 0.7.5-5 > Severity: wishlist > > Hi, > > Please upgrade package to use petsc 3.0 which is now in sid. I won't have time to do it soon. If you send me patches, I can upload anytime though. Thanks for any work

[Python-modules-team] Bug#519440: python-scipy: take care about deprecation warnings from numpy

2009-03-13 Thread Ondrej Certik
On Fri, Mar 13, 2009 at 9:55 AM, Yaroslav Halchenko wrote: > only later on I mentioned that scipy 0.7.0 is in unstable already. > Thanks! and it seems that it became more compliant to numpy 1.2.1 -- all > those warnings are gone. Since probably 0.7.0 will enter testing some > time soon, and there

[Python-modules-team] Bug#519483: python-numpy: Warning -> DeprecationWarning in numpy.histogram

2009-03-12 Thread Ondrej Certik
On Thu, Mar 12, 2009 at 11:27 AM, Yaroslav Halchenko wrote: > Package: python-numpy > Version: 1:1.2.1-1 > Severity: minor > > > Just trying to come up with more or less clean solution to suppress > deprecation > warnings "kindly" puking on me from different corners of numpy ;) Yes, it's very an

[Python-modules-team] Bug#519440: python-scipy: take care about deprecation warnings from numpy

2009-03-12 Thread Ondrej Certik
On Thu, Mar 12, 2009 at 10:17 AM, Yaroslav Halchenko wrote: > Package: python-scipy > Version: 0.6.0-12 > Severity: normal > > Any code which uses scipy and numpy on debian sid now provokes a flood of > deprecation warnings like: > > In [1]:import scipy > /usr/lib/python2.5/site-packages/scipy/mi

[Python-modules-team] Bug#508113: python-numpy-doc is missing documentation

2008-12-30 Thread Ondrej Certik
On Sun, Dec 7, 2008 at 4:36 PM, Joel wrote: > Package: python-numpy-doc > Version: 1:1.1.0-3 > > /usr/share/docs/python-numpy-doc/index.html > contains output from an epydoc sample but no doco related to numpy. Indeed, thanks for noticing. The upstream documentation has changed to sphinx, we only

[Python-modules-team] Bug#503148: histogram

2008-12-19 Thread Ondrej Certik
Reported upstream: http://sourceforge.net/mailarchive/forum.php?thread_name=85b5c3130812190918n33ab982dv2c06c9e98d9cd758%40mail.gmail.com&forum_name=matplotlib-users Ondrej ___ Python-modules-team mailing list Python-modules-team@lists.alioth.debian

[Python-modules-team] Bug#469848: reported upstream

2008-12-19 Thread Ondrej Certik
reassign 469848 python2.5 On Thu, Mar 20, 2008 at 9:40 AM, Ondrej Certik wrote: > Thanks for the bug report. I reported it upstream: > > http://code.google.com/p/sympy/issues/detail?id=752 > > as a workaround, use: > > $ pydoc2.4 -k foobarqux > $ I am now getting: on

[Python-modules-team] Bug#507746: python-numpy: link to cfunc.h missing in /usr/lib/python2.5/site-packages/numpy/core/include/numpy

2008-12-08 Thread Ondrej Certik
On Mon, Dec 8, 2008 at 1:49 AM, Janis Hagelberg <[EMAIL PROTECTED]> wrote: >> On Fri, Dec 5, 2008 at 12:32 AM, Janis Hagelberg <[EMAIL PROTECTED]> >> wrote: On Thu, Dec 4, 2008 at 2:36 AM, Janis Hagelberg <[EMAIL PROTECTED]> wrote: > Package: python-numpy > Version: 1:1.1.1-1

[Python-modules-team] Bug#507746: python-numpy: link to cfunc.h missing in /usr/lib/python2.5/site-packages/numpy/core/include/numpy

2008-12-04 Thread Ondrej Certik
On Thu, Dec 4, 2008 at 11:45 PM, Janis Hagelberg <[EMAIL PROTECTED]> wrote: >> On Thu, Dec 4, 2008 at 2:36 AM, Janis Hagelberg <[EMAIL PROTECTED]> >> wrote: >>> Package: python-numpy >>> Version: 1:1.1.1-1 >>> Severity: normal >>> >>> There seem to be a missing link to cfunc.h in >>> >>> usr/lib/py

[Python-modules-team] Bug#507746: python-numpy: link to cfunc.h missing in /usr/lib/python2.5/site-packages/numpy/core/include/numpy

2008-12-04 Thread Ondrej Certik
On Thu, Dec 4, 2008 at 2:36 AM, Janis Hagelberg <[EMAIL PROTECTED]> wrote: > Package: python-numpy > Version: 1:1.1.1-1 > Severity: normal > > There seem to be a missing link to cfunc.h in > > usr/lib/python2.5/site-packages/numpy/core/include/numpy > > This bug seems to be somehow related to bug #

[Python-modules-team] Bug#505999: python-numpy: memory leak in exponentiation

2008-11-17 Thread Ondrej Certik
On Mon, Nov 17, 2008 at 5:47 PM, Jiri Baum <[EMAIL PROTECTED]> wrote: > Package: python-numpy > Version: 1:1.1.0-3 > Severity: minor > > Raising zero to a negative power sometimes leaks memory, depending on the > types involved. While this is easy to work around (check for zero and deal > with it s

[Python-modules-team] Bug#501618: applied

2008-10-11 Thread Ondrej Certik
Thanks Thiemo for the patch! It is applied to matplotlib svn. Sandro, can the package be uploaded now? The upload fixes an RC bug. I noticed in the changelog: * Release in collaboration with Benjamin Drung, from Ubuntu So please upload or let me know and I'll upload. Thanks, Ondrej ___

[Python-modules-team] Bug#501501: status

2008-10-11 Thread Ondrej Certik
Hi Patricio, Angus and Helmut, thanks for reporting this annoying bug. Unfortunately I cannot reproduce it, it works just fine on my sid. If I find time, I'll try to install etch and upgrade to lenny if it shows up. This bug needs to be solved, it's a showstopper. So any help with this is appreci

[Python-modules-team] Bug#500815: /usr/share/pyshared/scipy/weave/inline_tools.py: printing of anything should be conditional on verbose level

2008-10-01 Thread Ondrej Certik
Hi Yaroslav! On Wed, Oct 1, 2008 at 7:13 PM, Yaroslav Halchenko <[EMAIL PROTECTED]> wrote: > Package: python-scipy > Version: 0.6.0-12 > Severity: normal > File: /usr/share/pyshared/scipy/weave/inline_tools.py > > ># it's nice to let the users know when anything gets compiled, as the ># sl

[Python-modules-team] Bug#499613: misnamed symlink in python-numpy

2008-09-25 Thread Ondrej Certik
Hi Sergio! On Mon, Sep 22, 2008 at 12:07 PM, Sergio Gelato <[EMAIL PROTECTED]> wrote: > On Sat, Sep 20, 2008 at 4:09 PM, Sergio Gelato <[EMAIL PROTECTED]> wrote: >> usr/share/pyshared/numpy/numarray/numpy/cfunc.h >> usr/share/pyshared/numpy/core/include/numpy/numpy/cfunc.h > > Oops. Right problem

[Python-modules-team] Bug#499613: misnamed symlink in python-numpy

2008-09-20 Thread Ondrej Certik
On Sat, Sep 20, 2008 at 4:09 PM, Sergio Gelato <[EMAIL PROTECTED]> wrote: > Package: python-numpy > Version: 1:1.1.1-1 > > The bug is also present in earlier versions (including Ubuntu's > 1:1.0.4-6ubuntu3 where I originally noticed it). > > In debian/python-numpy.links, the line > > usr/share/pysh

[Python-modules-team] Bug#497786: import of numpy fails for python2.5

2008-09-04 Thread Ondrej Certik
On Fri, Sep 5, 2008 at 2:29 AM, tony mancill <[EMAIL PROTECTED]> wrote: > Ondrej Certik wrote: >> On Fri, Sep 5, 2008 at 12:12 AM, tony mancill <[EMAIL PROTECTED]> wrote: >>> -BEGIN PGP SIGNED MESSAGE- >>> Hash: SHA1 >>> >>> FYI,

[Python-modules-team] Bug#497786: import of numpy fails for python2.5

2008-09-04 Thread Ondrej Certik
On Fri, Sep 5, 2008 at 12:12 AM, tony mancill <[EMAIL PROTECTED]> wrote: > -BEGIN PGP SIGNED MESSAGE- > Hash: SHA1 > > FYI, I'm able to reproduce this bug on 3 separate systems i386: > > On a lenny system that was installed from a jigdo DVD created on 7/21 that > has been updated daily, on

[Python-modules-team] Bug#497786: python-numpy: import numpy fails for python 2.5

2008-09-04 Thread Ondrej Certik
On Thu, Sep 4, 2008 at 9:42 PM, Kumar Appaiah <[EMAIL PROTECTED]> wrote: > On Thu, Sep 04, 2008 at 10:16:43PM +0300, Juha Jäykkä wrote: >> Oh! I neglected to be specific: numpy was installed *after* the upgrade to >> lenny. It really looks like numpy != lenny's current version creates some >> symli

[Python-modules-team] Bug#497786: python-numpy: import numpy fails for python 2.5

2008-09-04 Thread Ondrej Certik
> Thanks for the update, Juha. > > Now, I just took some time and did the following: > > 1. Use debootstrap to make a Lenny chroot with python-numpy. I > chrooted and ran the tests, and discovered that all tests ran > successfully. This is with the Lenny version. > > 2. Repeated the same process wi

[Python-modules-team] Bug#497786: python-numpy: import numpy fails for python 2.5

2008-09-04 Thread Ondrej Certik
On Thu, Sep 4, 2008 at 11:42 AM, Juha Jäykkä <[EMAIL PROTECTED]> wrote: > Package: python-numpy > Version: 1:1.1.0-3 > Severity: grave > Justification: renders package unusable > > > Python-numpy seems to be unusable for python 2.5 in lenny. This is a fresh > upgrade from etch, just aptitude instal

[Python-modules-team] Bug#495457: python-numpy: Error while loading a library

2008-08-18 Thread Ondrej Certik
On Sun, Aug 17, 2008 at 6:13 PM, Christophe Combelles <[EMAIL PROTECTED]> wrote: > This is actually fixed in numpy 1.1.1, and the diff is attached. I just uploaded the new numpy 1.1.1, let me know if this is fixed and if it is ok to close this issue. Ondrej

[Python-modules-team] Bug#495457: python-numpy: Error while loading a library

2008-08-17 Thread Ondrej Certik
On Sun, Aug 17, 2008 at 5:07 PM, Christophe Combelles <[EMAIL PROTECTED]> wrote: > Package: python-numpy > Version: 1:1.1.0-3 > Severity: normal > > > I get an error while trying to 'import svm'. > libsvm is installed from source: > http://scipy.org/svn/scikits/trunk/scikits/learn/scikits/learn/mac

[Python-modules-team] Bug#494367: pyglet 1.1 packages

2008-08-12 Thread Ondrej Certik
On Tue, Aug 12, 2008 at 8:39 AM, Carlos Laviola <[EMAIL PROTECTED]> wrote: > severity 494367 wishlist > thanks > > Hi guys, > > I updated python-pyglet to 1.1. You can see the package at: > http://people.debian.org/~claviola/pyglet/ > > Very simple stuff, just uupdate'd based on a tarball created

[Python-modules-team] Bug#489253: Fw: should numpy be built with atlas?

2008-07-08 Thread Ondrej Certik
On Tue, Jul 8, 2008 at 3:05 PM, Tiziano Zito <[EMAIL PROTECTED]> wrote: > Hi Ondrej, > >> $ ./test_atlas.py >> Using ATLAS: >> 0.53141283989 >> $ wajig remove atlas3-base libatlas3gf-base >> $ ./test_atlas.py >> Using ATLAS: >> 1.64572000504 >> >> So it seems to work, even though the difference is

[Python-modules-team] Bug#489253: should numpy be built with atlas?

2008-07-08 Thread Ondrej Certik
On Tue, Jul 8, 2008 at 1:58 PM, Tiziano Zito <[EMAIL PROTECTED]> wrote: > On 7/8/08, Matthias Klose <[EMAIL PROTECTED]> wrote: >> thanks for the update. Looking at the blas package, I see that the >> cblas library is included in libblas3. So it looks like the numpy >> check is wrong, testing fo

[Python-modules-team] Bug#489253: should numpy be built with atlas?

2008-07-07 Thread Ondrej Certik
On Mon, Jul 7, 2008 at 2:12 PM, Matthias Klose <[EMAIL PROTECTED]> wrote: > Package: python-numpy > Version: 1:1.1.0-2 > Severity: serious > > python-numpy now has an unconditional dependency on libatlas3gf-base, > needing the "specialized" atlas libraries as a runtime > dependency. Users still sho

[Python-modules-team] Bug#489568: FTBFS: build-depends on unavailable atlas on armel

2008-07-06 Thread Ondrej Certik
On Sun, Jul 6, 2008 at 11:02 PM, Riku Voipio <[EMAIL PROTECTED]> wrote: > Package: python-numpy > Version: 1:1.1.0-2 > Severity: serious > Tags: patch > > atlas is not available on armel, and after a quick look neither on alpha. > I'd also suggest dropping > libatlas-sse-dev|libatlas-sse2-dev|liba

[Python-modules-team] Bug#489253: python-numpy: enable ATLAS support?

2008-07-06 Thread Ondrej Certik
; === > --- debian/control (revision 5836) > +++ debian/control (working copy) > @@ -3,7 +3,7 @@ > Priority: optional > Maintainer: Debian Python Modules Team > > Uploaders: Marco Presi (Zufus)

[Python-modules-team] Bug#489253: python-numpy: enable ATLAS support?

2008-07-04 Thread Ondrej Certik
TED]>, José Fonseca <[EMAIL PROTECTED]>, Matthias Klose <[EMAIL PROTECTED]>, Ondrej Certik <[EMAIL PROTECTED]>, Kumar Appaiah <[EMAIL PROTECTED]> -Build-Depends: cdbs (>= 0.4.43), python-all-dev, python-all-dbg, python-central (>= 0.6), gfortran (>= 4:4.2), libblas-dev [!a

[Python-modules-team] Bug#489149: python-scipy Numeric/Numpy

2008-07-03 Thread Ondrej Certik
On Thu, Jul 3, 2008 at 3:44 PM, Chris Walker <[EMAIL PROTECTED]> wrote: > Package: python-scipy > Version: 0.6.0-11 > > The package description says: > > SciPy supplements the popular Numeric module, gathering a variety of > high level science and engineering modules together as a single > packa

[Python-modules-team] Bug#488453: [python-scipy] python-scipy-core transition package

2008-06-30 Thread Ondrej Certik
On Mon, Jun 30, 2008 at 7:08 PM, Chris Walker <[EMAIL PROTECTED]> wrote: > On Mon, Jun 30, 2008 at 01:51:42AM +0200, Ondrej Certik wrote: >> See here: >> >> http://wiki.debian.org/python-scipy >> >> it's deprecated, but there are more packages that nee

[Python-modules-team] Bug#488453: [python-scipy] python-scipy-core transition package

2008-06-29 Thread Ondrej Certik
Hi Chris, On Sun, Jun 29, 2008 at 2:44 AM, Chris Walker <[EMAIL PROTECTED]> wrote: > Package: python-scipy > Version: 0.6.0-11 > Severity: > > There is a package python-scipy-core in the archive that python-scipy > conflicts and replaces. I have filed Bug#48845 to ask that You probably meant #48

[Python-modules-team] Bug#486329: Please also ship Numpy documentation

2008-06-15 Thread Ondrej Certik
On Sun, Jun 15, 2008 at 1:45 PM, Emilio Pozuelo Monfort <[EMAIL PROTECTED]> wrote: > Package: python-numpy-doc > Version: 1:1.1.0-1 > Severity: minor > Tags: patch > > Hi, > > python-numpy-doc currently ships f2py documentation, but not numpy's. This > patch > against python-modules SVN makes it s

[Python-modules-team] Bug#476235: Fixed in r4143.

2008-04-15 Thread Ondrej Certik
On Tue, Apr 15, 2008 at 3:30 PM, Stéfan van der Walt <[EMAIL PROTECTED]> wrote: > Fixed in r4143: > > http://projects.scipy.org/scipy/scipy/changeset/4143 Thanks a lot Stefan for fixing this. Ondrej ___ Python-modules-team mailing list Python-modules-t

[Python-modules-team] Bug#476235: python-scipy: useless print statement in special.sph_yn()

2008-04-15 Thread Ondrej Certik
On Tue, Apr 15, 2008 at 11:46 AM, Pierre <[EMAIL PROTECTED]> wrote: > Package: python-scipy > Version: 0.6.0-10 > Severity: minor > Tags: patch > > A useless "print z" appears in the definition of sph_yn() > (/usr/lib/python2.[45]/site-packages/scipy/special/basic.py). It seems to be > left f

[Python-modules-team] Bug#475990: python-scipy: FTBFS: _fftpackmodule.c:863: undefined reference to `PyArg_ParseTupleAndKeywords'

2008-04-14 Thread Ondrej Certik
On Mon, Apr 14, 2008 at 12:02 PM, Ondrej Certik <[EMAIL PROTECTED]> wrote: > On Mon, Apr 14, 2008 at 12:53 PM, Lucas Nussbaum > <[EMAIL PROTECTED]> wrote: > > > > /build/user/python-scipy-0.6.0/build/src.linux-i686-2.4/fortranobject.c:27: > undefined r

[Python-modules-team] Bug#475990: python-scipy: FTBFS: _fftpackmodule.c:863: undefined reference to `PyArg_ParseTupleAndKeywords'

2008-04-14 Thread Ondrej Certik
On Mon, Apr 14, 2008 at 12:53 PM, Lucas Nussbaum <[EMAIL PROTECTED]> wrote: > > > /build/user/python-scipy-0.6.0/build/src.linux-i686-2.4/fortranobject.c:27: > undefined reference to `PyDict_SetItemString' > > > /build/user/python-scipy-0.6.0/build/src.linux-i686-2.4/fortranobject.c:21: > und

[Python-modules-team] Bug#474930: python-scipy: docstring for leastsq (in scipy.optimize) incorrectly describes 'ier'

2008-04-08 Thread Ondrej Certik
On Tue, Apr 8, 2008 at 1:24 AM, Andrzej Novak <[EMAIL PROTECTED]> wrote: > Package: python-scipy > Version: 0.6.0-5.1 > Severity: minor > > > Docstring for leastsq incorrectly describes the returned variable > ier. It states, > > ier -- an integer flag. If it is equal to 1 the solution was

[Python-modules-team] Bug#475017: python-numpy: missing parentheses in /usr/share/pyshared/numpy/f2py/rules.py line 1222 (fixed upstream)

2008-04-08 Thread Ondrej Certik
On Tue, Apr 8, 2008 at 3:49 PM, Ludovic Aubry <[EMAIL PROTECTED]> wrote: > Package: python-numpy > Version: 1:1.0.4-7 > Severity: normal > Tags: patch > > f2py fails while building module without this fix. Thanks for the bug report. Upstream is going to release a new version by the end of the

[Python-modules-team] Bug#472043: python-scipy: ftbfs with python-central 0.6

2008-03-21 Thread Ondrej Certik
Hi Matthias On Fri, Mar 21, 2008 at 7:27 PM, Matthias Klose <[EMAIL PROTECTED]> wrote: > Package: python-scipy > Version: 0.6.0-10 > Severity: serious > Usertags: ftbfs-new-pycentral > > python-central 0.6 uses now a package and tool independent directory > to store the architecture independe

[Python-modules-team] Bug#471825: python-scipy: Uninstallable, broken symlink /usr/lib/python2.4/site-packages/scipy/LICENSE.txt

2008-03-20 Thread Ondrej Certik
On Thu, Mar 20, 2008 at 2:14 PM, Ondrej Certik <[EMAIL PROTECTED]> wrote: > On Thu, Mar 20, 2008 at 1:24 PM, Erich Schubert <[EMAIL PROTECTED]> wrote: > > Package: python-scipy > > Version: 0.6.0-9 > > Severity: important > > > > [...] >

[Python-modules-team] Bug#471825: python-scipy: Uninstallable, broken symlink /usr/lib/python2.4/site-packages/scipy/LICENSE.txt

2008-03-20 Thread Ondrej Certik
On Thu, Mar 20, 2008 at 1:24 PM, Erich Schubert <[EMAIL PROTECTED]> wrote: > Package: python-scipy > Version: 0.6.0-9 > Severity: important > > [...] > file does not exist: /usr/lib/python2.4/site-packages/scipy/LICENSE.txt > pycentral: pycentral pkginstall: error byte-compiling files (534) >

[Python-modules-team] Bug#469848: reported upstream

2008-03-20 Thread Ondrej Certik
Thanks for the bug report. I reported it upstream: http://code.google.com/p/sympy/issues/detail?id=752 as a workaround, use: $ pydoc2.4 -k foobarqux $ Ondrej ___ Python-modules-team mailing list Python-modules-team@lists.alioth.debian.org http://

[Python-modules-team] Bug#471549: python-scipy_0.6.0-8_mips: FTBFS: No such file or directory

2008-03-18 Thread Ondrej Certik
On Tue, Mar 18, 2008 at 10:36 PM, Aníbal Monsalve Salazar <[EMAIL PROTECTED]> wrote: > Package: python-scipy > Severity: serious > Version: 0.6.0-8 > Tags: sid > Justification: fails to build from source > > There was an error while trying to autobuild your package with > pbuilder: > > [...]

[Python-modules-team] Bug#470293: python-numpy: bug in numpy.histogram

2008-03-10 Thread Ondrej Certik
On Mon, Mar 10, 2008 at 3:10 PM, Manuel Metz <[EMAIL PROTECTED]> wrote: > Package: python-numpy > Version: 1:1.0.4-6 > Severity: important > Tags: patch > > > There is a bug in site-packages/numpy/lib/function_base.py, line 154 > > The line is > if(any(bins[1:]-bins[:-1] < 0)): > which caus

[Python-modules-team] Bug#464784: python-numpy please transition to gfortran/libblas-dev/lapack-dev

2008-02-24 Thread Ondrej Certik
On Sun, Feb 24, 2008 at 12:44 PM, David Cournapeau <[EMAIL PROTECTED]> wrote: > Hi, > > Following a comment done on numpy bug tracking system (ticket #667): > dotblas uses the CBLAS API, and as such needs CBLAS; CBLAS functions > (cblas_*) are simply not provided by BLAS. They are provided by

[Python-modules-team] Bug#464784: python-numpy: After transition to gfortran _dotblas.so is lost

2008-02-23 Thread Ondrej Certik
On Fri, Feb 22, 2008 at 8:40 PM, [EMAIL PROTECTED] <[EMAIL PROTECTED]> wrote: > Hi! Unfortunately I don't think I'll manage to investigate this further > today, I'll try to have a look at it in the week end. > > Regarding the _dotblas.so problem: > - on an etch system > $ ldd /usr/lib/python2.4

[Python-modules-team] Bug#467095: python-numpy: numpy.average() returns the wrong result with weights.

2008-02-22 Thread Ondrej Certik
On Sat, Feb 23, 2008 at 1:08 AM, Greg Kochanski <[EMAIL PROTECTED]> wrote: > Package: python-numpy > Version: 1:1.0.4-5 > Severity: normal > > > >>> x = numpy.array([[1,2,3,4,5,6,2],[2,2,3,4,5,6,3]]).transpose() > >>> wt = numpy.array([1,1,1,1,1,1,2]) > >>> numpy.average(x, weights=wt, axis=0)

[Python-modules-team] Bug#466868: python-scipy -- please transition to use gfortran based lapack, blas

2008-02-22 Thread Ondrej Certik
On Sat, Feb 23, 2008 at 1:40 AM, Ondrej Certik <[EMAIL PROTECTED]> wrote: > > On Thu, Feb 21, 2008 at 4:31 PM, Ondrej Certik <[EMAIL PROTECTED]> wrote: > > On Thu, Feb 21, 2008 at 4:11 PM, Kumar Appaiah <[EMAIL PROTECTED]> wrote: > > > Package: p

[Python-modules-team] Bug#466868: python-scipy -- please transition to use gfortran based lapack, blas

2008-02-22 Thread Ondrej Certik
On Thu, Feb 21, 2008 at 4:31 PM, Ondrej Certik <[EMAIL PROTECTED]> wrote: > On Thu, Feb 21, 2008 at 4:11 PM, Kumar Appaiah <[EMAIL PROTECTED]> wrote: > > Package: python-scipy > > Version: 0.6.0-5.1 > > Severity: important > > User: [EMAIL PROTECTED]

[Python-modules-team] Bug#464784: python-numpy: After transition to gfortran _dotblas.so is lost

2008-02-22 Thread Ondrej Certik
On Fri, Feb 22, 2008 at 4:09 PM, <[EMAIL PROTECTED]> wrote: > Package: python-numpy > Version: 1:1.0.4-6 > Followup-For: Bug #464784 > > After transition to gfortran it appears that the matrix > multiplication function (numpy.dot) is now linked to the slow > version in numpy/core/multiarray.s

[Python-modules-team] Bug#466392: python-scipy: adding zvode to scipy.integrate

2008-02-21 Thread Ondrej Certik
On Thu, Feb 21, 2008 at 11:16 AM, <[EMAIL PROTECTED]> wrote: > Quoting Ondrej Certik <[EMAIL PROTECTED]>: > > $ apt-get source python-scipy > > $ cd python-scipy-0.6.0/ > > $ head -n 15 debian/control > > [...] > > Vcs-Svn: svn://svn.debia

[Python-modules-team] Bug#466868: python-scipy -- please transition to use gfortran based lapack, blas

2008-02-21 Thread Ondrej Certik
On Thu, Feb 21, 2008 at 4:11 PM, Kumar Appaiah <[EMAIL PROTECTED]> wrote: > Package: python-scipy > Version: 0.6.0-5.1 > Severity: important > User: [EMAIL PROTECTED] > Usertags: gfortran > > Hi! > > I would request you to please shift Build-Depends to use the new > gfortran based Lapack and

[Python-modules-team] Bug#466392: python-scipy: adding zvode to scipy.integrate

2008-02-19 Thread Ondrej Certik
On Feb 19, 2008 2:04 PM, Fabrice Silva <[EMAIL PROTECTED]> wrote: > Le lundi 18 février 2008 à 18:06 +0100, Ondrej Certik a écrit : > > > Is it possible to add zvode to scipy.integrate according to > > > http://www.scipy.org/scipy/scipy/ticket/334 I've tried to

[Python-modules-team] Bug#466392: python-scipy: adding zvode to scipy.integrate

2008-02-18 Thread Ondrej Certik
On Feb 18, 2008 3:28 PM, Fabrice Silva <[EMAIL PROTECTED]> wrote: > Package: python-scipy > Version: 0.6.0-5.1 > Severity: wishlist > > Is it possible to add zvode to scipy.integrate according to > http://www.scipy.org/scipy/scipy/ticket/334 I've tried to apply the > patches but the following messa

[Python-modules-team] Bug#463007: python-numpy: Problem with the numarray includes

2008-02-06 Thread Ondrej Certik
Hi Frederic, On Jan 28, 2008 9:52 PM, picca frederic <[EMAIL PROTECTED]> wrote: > Package: python-numpy > Version: 1:1.0.4-5 > Severity: normal > > > Hello > > In the numpy documentation the transition from numarray to numpy for the > C extension is explained like this: > #include "numarray/libnum

[Python-modules-team] Bug#459716: sympy: Please split pyglet into a separate package

2008-01-08 Thread Ondrej Certik
On Jan 8, 2008 11:38 AM, Michael Hanke <[EMAIL PROTECTED]> wrote: > Hi Ondrej, > > On Tue, Jan 08, 2008 at 11:33:00AM +0100, Ondrej Certik wrote: > > > > However, soon PyEPL will depend on pyglet and I don't think that a > > > package dependency o

[Python-modules-team] Bug#459716: sympy: Please split pyglet into a separate package

2008-01-08 Thread Ondrej Certik
Hi Michale, On Jan 8, 2008 10:39 AM, Michael Hanke <[EMAIL PROTECTED]> wrote: > Package: sympy > Severity: wishlist > > Hi sympy maintainers, > > I am one of the maintainers of the PyEPL package > > http://packages.debian.org/sid/python-pyepl > > PyEPL upstream is planning to switch from PyGame t

[Python-modules-team] Bug#459313: fixed upstream

2008-01-06 Thread Ondrej Certik
So this was incorporated upstream in the patch: http://hg.sympy.org/sympy/rev/15810ab90e01 I didn't yet upload a new release to Debian, because we discovered a bug, that made 3D plotting broken, so we fixed that first and released today again. I'll wait a day or two, if all is ok, then package to

[Python-modules-team] Bug#459411: isympy fails to start

2008-01-06 Thread Ondrej Certik
On Jan 6, 2008 1:51 PM, Soeren Sonnenburg <[EMAIL PROTECTED]> wrote: > > On Sun, 2008-01-06 at 13:25 +0100, Ondrej Certik wrote: > > On Jan 6, 2008 11:44 AM, Soeren Sonnenburg <[EMAIL PROTECTED]> wrote: > > > Package: python-sympy > > > Version: 0.5.9-1 &

[Python-modules-team] Bug#459411: isympy fails to start

2008-01-06 Thread Ondrej Certik
On Jan 6, 2008 11:44 AM, Soeren Sonnenburg <[EMAIL PROTECTED]> wrote: > Package: python-sympy > Version: 0.5.9-1 > Severity: normal > > $ isympy > --- > exceptions.AttributeErrorTraceback (most recen

[Python-modules-team] Bug#459316: python-sympy: a menu item for isympy would be nice

2008-01-05 Thread Ondrej Certik
On Jan 5, 2008 3:49 PM, Ondrej Certik <[EMAIL PROTECTED]> wrote: > On Jan 5, 2008 2:51 PM, Bernhard R. Link <[EMAIL PROTECTED]> wrote: > > Package: python-sympy > > Version: 0.5.9-1 > > Severity: wishlist > > Tags: patch > > > > It would be

[Python-modules-team] Bug#459316: python-sympy: a menu item for isympy would be nice

2008-01-05 Thread Ondrej Certik
On Jan 5, 2008 2:51 PM, Bernhard R. Link <[EMAIL PROTECTED]> wrote: > Package: python-sympy > Version: 0.5.9-1 > Severity: wishlist > Tags: patch > > It would be nice if python-sympy would install a menu item for > isympy, so people can find it in the menu. > > Additionally it would be nice if pyth

[Python-modules-team] Bug#459313: python-sympy: would be nice if isympy would refer to the documentation

2008-01-05 Thread Ondrej Certik
On Jan 5, 2008 2:46 PM, Bernhard R. Link <[EMAIL PROTECTED]> wrote: > Package: python-sympy > Version: 0.5.9-1 > Severity: wishlist > Tags: patch > > It would be nice if isympy's welcome message would include information > about the documentation (like it does for example with attached patch). > >

[Python-modules-team] Bug#459076: forwarded

2008-01-04 Thread Ondrej Certik
> > http://code.google.com/p/sympy/issues/detail?id=544 > I reported the problem to pyglet: http://code.google.com/p/pyglet/issues/detail?id=211 and it's fixed now. And it's fixed in sympy hg too: http://hg.sympy.org/sympy/rev/964b03ff8ab7 but unfortunately, it's not in the sympy we released t

[Python-modules-team] Bug#459076: forwarded

2008-01-04 Thread Ondrej Certik
tags 459076 upstream thank you Hi Bernhard, Thanks a lot for this exemplary bug report with a patch. Forwarded upstream (=us). :) http://code.google.com/p/sympy/issues/detail?id=544 Please report all other bugs/suggestions that you might find in sympy. Thanks, Ondrej

[Python-modules-team] Bug#456892: FTBFS

2007-12-31 Thread Ondrej Certik
On Dec 31, 2007 2:07 PM, Philipp Kern <[EMAIL PROTECTED]> wrote: > On Tue, Dec 18, 2007 at 11:18:37AM +0100, Ondrej Certik wrote: > > When trying to build the source package from unstable, I get: > > This caused a FTBFS on arm. I thus uploaded the attached NMU with > Ku

[Python-modules-team] Bug#458383: [IPython-dev] please include documentation sources in the tarball

2007-12-30 Thread Ondrej Certik
Hi Fernando, On Dec 30, 2007 11:25 PM, Fernando Perez <[EMAIL PROTECTED]> wrote: > On Dec 30, 2007 2:57 PM, Ondrej Certik <[EMAIL PROTECTED]> wrote: > > Hi, > > > > while packaging ipython in Debian, we run across this problem: > > > > http://

[Python-modules-team] Bug#458383: upstream

2007-12-30 Thread Ondrej Certik
I sent the attached email to upstream (I forgot to CC this bug). The email didn't yet show up in: http://lists.ipython.scipy.org/pipermail/ipython-dev/2007-December/thread.html maybe I will have to subscribe to that list. I hate so many mailman lists... Ondrej - Hi

[Python-modules-team] Bug#448530: A workaround to this problem.

2007-12-22 Thread Ondrej Certik
On Dec 22, 2007 5:40 PM, Kumar Appaiah <[EMAIL PROTECTED]> wrote: > Dear Jan, > > With Ondrej's help, I've managed to find a workaround to this > problem. Rather, let me say that this issue isn't numpy's, but more of > Atlas'. > > The issue you menion here happens when we link numpy against > Atlas

[Python-modules-team] Bug#457329: python-numpy: potential misbuild of all Fortran built with numpy distutils

2007-12-21 Thread Ondrej Certik
Hi Paul, > Depending on the machine on which they are run, numpy distutils are > capable of appending -msse2 to the compiler flags of all Fortran code. > > [ see numpy/distutils/fcompiler/gnu.py ] > > This means that if [say] the canonical scipy package is built on a > Pentium 4 or better, it may

[Python-modules-team] Bug#448530: bug reproduced

2007-12-21 Thread Ondrej Certik
> Ondrej: did you have a look at the compiler flags that numpy can > choose to use? Is there another latent bug here (manifesting in > anything that uses numpy.distutils)? I don't see any, but the atlas linkage is kind of whacky, but I am really no expert in this. However, if you propose some sol

[Python-modules-team] Bug#448530: bug reproduced

2007-12-20 Thread Ondrej Certik
Upstream also noticed a very similar, if not the same, bug: http://projects.scipy.org/scipy/numpy/ticket/551 Ondrej ___ Python-modules-team mailing list Python-modules-team@lists.alioth.debian.org http://lists.alioth.debian.org/mailman/listinfo/pytho

[Python-modules-team] Bug#456869: [PATCH] petsc4py: FTBFS: /usr/lib/petsc/include/petsc.h:138:17: error: mpi.h: No such file or directory

2007-12-20 Thread Ondrej Certik
Hi Manuel, > Hello Ondrej, > > attached you'll find a patch that solved the FTBFS of your package for > me. It patches the source directly, so you have to convert it so it can > be used with your favorite patch system. > > The problem is that you can't find the MPI includes, as you already > state

[Python-modules-team] Bug#448530: bug reproduced

2007-12-20 Thread Ondrej Certik
On Dec 20, 2007 5:36 PM, Ondrej Certik <[EMAIL PROTECTED]> wrote: > > I have forwarded this bug upstream: > > > > http://projects.scipy.org/pipermail/numpy-discussion/2007-December/030320.html > > > > Do you think you could take part in the discussion in t

[Python-modules-team] Bug#448530: bug reproduced

2007-12-20 Thread Ondrej Certik
> I have forwarded this bug upstream: > > http://projects.scipy.org/pipermail/numpy-discussion/2007-December/030320.html > > Do you think you could take part in the discussion in there to help > trace this bug down? Hi Jan, upstream is willing to help with fixing this bug, but unfortunately, I d

[Python-modules-team] Bug#457060: move include files to /usr/include

2007-12-19 Thread Ondrej Certik
Package: python-numpy Version: 1:1.0.4-3 Severity: normal --- Please enter the report below this line. --- the files like arrayobject.h, arrayscalars.h etc. used to be in: /usr/lib/python2.4/site-packages/numpy/core/include/numpy/ now they are in /usr/share/python-support/python-numpy/numpy/co

[Python-modules-team] Bug#456892: FTBFS

2007-12-18 Thread Ondrej Certik
Package: python-scipy Version: 0.6.0-5 Severity: normal --- Please enter the report below this line. --- When trying to build the source package from unstable, I get: [...] swig: scipy/linsolve/umfpack/umfpack.i swig -python -o build/src.linux-i686-2.4/scipy/linsolve/umfpack/_umfpack_wrap.c -ou

[Python-modules-team] Bug#448530: bug reproduced

2007-12-17 Thread Ondrej Certik
Hi Jan, indeed I also get the segfault now: $ LD_PRELOAD=/usr/lib/atlas/sse2/libblas.so.3 python test.py About to multiply Segmentation fault $ LD_PRELOAD=/usr/lib/atlas/sse/libblas.so.3 python test.py About to multiply Multiplied I have forwarded this bug upstream: http://projects.scipy.org/

[Python-modules-team] Bug#454484: closed by Ondrej Certik <[EMAIL PROTECTED]> (seems to work, closing)

2007-12-17 Thread Ondrej Certik
On Dec 15, 2007 12:47 AM, Erich Schubert <[EMAIL PROTECTED]> wrote: > Hi, > Your mails never reached me. Did you send them to the BTS only maybe? Yes, only to BTS, I thought they will be automatically forwarded to you. Sorry about that. > As you can see from the original bug report, I didn't have

[Python-modules-team] Bug#448530: more info

2007-12-14 Thread Ondrej Certik
Hi Jan, could you please send us more information about this bug? We would like to reproduce it and fix it. See my previous email about that, or browse it online here: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=448530 Thanks a lot, Ondrej ___

[Python-modules-team] Bug#448530: unable to reproduce

2007-12-08 Thread Ondrej Certik
Hi, I am sorry it has taken so long to repond to this bugreport. We just moved the package to DPMT, so now we should be able to respond much more quickly. I am unable to run your script on the current unstable. Am I doing something wrong? $ python test.py Traceback (most recent call last): Fi

[Python-modules-team] Bug#416677: fixed?

2007-12-08 Thread Ondrej Certik
This bug seems to went away in the current unstable: [EMAIL PROTECTED]:/tmp$ cat crash.py from numpy import array sel = array([False,True]) p1 = array([11.]) p1[sel] = p1 [EMAIL PROTECTED]:/tmp$ python crash.py [EMAIL PROTECTED]:/tmp$ Could you please confirm it? We'll then close the bug in a

[Python-modules-team] Bug#454484: please check again

2007-12-08 Thread Ondrej Certik
Hi, the new packages are in the archive, please try it again. I am not able to reproduce it. I purged all atlas packages and did: $ wajig install python-scipy Reading package lists... Done Building dependency tree Reading state information... Done The following packages were automatically

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