Re: subprocess.Popen and multiprocessing fails to execute external program

2013-01-09 Thread Dave Angel
On 01/09/2013 11:08 PM, Niklas Berliner wrote: > I have a pipline that involves processing some data, handing the data to an > external program (t_coffee used for sequence alignments in bioinformatics), > and postprocessing the result. Since I have a lot of data, I need to run my > pipeline in para

subprocess.Popen and multiprocessing fails to execute external program

2013-01-09 Thread Niklas Berliner
I have a pipline that involves processing some data, handing the data to an external program (t_coffee used for sequence alignments in bioinformatics), and postprocessing the result. Since I have a lot of data, I need to run my pipeline in parallel which I implemented using the multiprocessing modu