Re: extracting substrings from a file

2006-09-11 Thread Tim Williams
On 11 Sep 2006 05:29:17 -0700, [EMAIL PROTECTED] <[EMAIL PROTECTED]> wrote: > Hi, > > I have a file with several entries in the form: > > AFFX-BioB-5_at E. coli /GEN=bioB /gb:J04423.1 NOTE=SIF > corresponding to nucleotides 2032-2305 of /gb:J04423.1 DEF=E.coli > 7,8-diamino-pelargonic acid (b

Re: extracting substrings from a file

2006-09-11 Thread Paul McGuire
<[EMAIL PROTECTED]> wrote in message news:[EMAIL PROTECTED] > Hi, > > I have a file with several entries in the form: > > AFFX-BioB-5_at E. coli /GEN=bioB /gb:J04423.1 NOTE=SIF > corresponding to nucleotides 2032-2305 of /gb:J04423.1 DEF=E.coli > 7,8-diamino-pelargonic acid (bioA), biotin synt

Re: extracting substrings from a file

2006-09-11 Thread Larry Bates
[EMAIL PROTECTED] wrote: > Hi, > > I have a file with several entries in the form: > > AFFX-BioB-5_at E. coli /GEN=bioB /gb:J04423.1 NOTE=SIF > corresponding to nucleotides 2032-2305 of /gb:J04423.1 DEF=E.coli > 7,8-diamino-pelargonic acid (bioA), biotin synthetase (bioB), > 7-keto-8-

Re: extracting substrings from a file

2006-09-11 Thread John Machin
[EMAIL PROTECTED] wrote: > Hi, > > I have a file with several entries in the form: > > AFFX-BioB-5_at E. coli /GEN=bioB /gb:J04423.1 NOTE=SIF > corresponding to nucleotides 2032-2305 of /gb:J04423.1 DEF=E.coli > 7,8-diamino-pelargonic acid (bioA), biotin synthetase (bioB), > 7-keto-8-am

Re: extracting substrings from a file

2006-09-11 Thread Tim Chase
> I have a file with several entries in the form: > > AFFX-BioB-5_at E. coli /GEN=bioB /gb:J04423.1 NOTE=SIF > corresponding to nucleotides 2032-2305 of /gb:J04423.1 DEF=E.coli > 7,8-diamino-pelargonic acid (bioA), biotin synthetase (bioB), > 7-keto-8-amino-pelargonic acid synthetase (

extracting substrings from a file

2006-09-11 Thread sofiafig
Hi, I have a file with several entries in the form: AFFX-BioB-5_at E. coli /GEN=bioB /gb:J04423.1 NOTE=SIF corresponding to nucleotides 2032-2305 of /gb:J04423.1 DEF=E.coli 7,8-diamino-pelargonic acid (bioA), biotin synthetase (bioB), 7-keto-8-amino-pelargonic acid synthetase (bioF), bioC p