Re: Need feedback on ORF-extracting code

2009-08-12 Thread Terry Reedy
gb345 wrote: Hi everyone. I'm relatively new to Python, and could use your feedback on the code below. First some nomenclature. A "nucleotide" is one of A, C, G, T, or U. (In practice, a sequence of such nucleotides never contains both T and U, but this fact is not important in what follows.

Need feedback on ORF-extracting code

2009-08-12 Thread gb345
Hi everyone. I'm relatively new to Python, and could use your feedback on the code below. First some nomenclature. A "nucleotide" is one of A, C, G, T, or U. (In practice, a sequence of such nucleotides never contains both T and U, but this fact is not important in what follows.) A "codon" i